RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CYP4F12Q9HCS2 524 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 UBIAD1Q9Y5Z9 338 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 A0A0A0MRY4 1105 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 CLDN25C9JDP6 229 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 KCNH1O95259 989 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 IL6P05231 212 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 BICRALQ6AI39 1079 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 CASP12Q6UXS9 341 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 PRR23BQ6ZRT6 265 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 RNFT2Q96EX2 444 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 SPATA13Q96N96 652 aa17.73■□□□□ 0.43
PCDHA13-201ENST00000289272 PRR5-ARHGAP8B1AHC4 643 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 MYL12BO14950 172 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 GUCA1CO95843 209 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 VTNP04004 478 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 HSMCR30P0CW71 290 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 ARHGAP8P85298 464 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 FOXD4Q12950 439 aaPredicted RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CYP1B1Q16678 543 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 RINLQ6ZS11 566 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 ADGRF2Q8IZF7 708 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 FBXO39Q8N4B4 442 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CPB2Q96IY4 423 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CYB561D2O14569 222 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 LSM1O15116 133 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 COL6A2P12110 1019 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CCT3P49368 545 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 ZNF280DQ6N043 979 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 AADACL2Q6P093 401 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 MRPL57Q9BQC6 102 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 RHOBTB2Q9BYZ6 727 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 RIBC2Q9H4K1 309 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CCDC59Q9P031 241 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 KDM4FA0A1W2PPD8 638 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 TGFB1I1O43294 461 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 STX11O75558 287 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 B3GAT3O94766 335 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 FAM187BQ17R55 369 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 KHDC1Q4VXA5 237 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CENPIQ92674 756 aaPredicted RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 MAF1Q9H063 256 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 REEP1Q9H902 201 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 STARD7Q9NQZ5 370 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 TRNAU1APQ9NX07 287 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 ACKR2O00590 384 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 HPCAP84074 193 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 PERM1Q5SV97 790 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 RAB2BQ8WUD1 216 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 TBC1D30Q9Y2I9 924 aa17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 TNPO3Q9Y5L0 923 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-201ENST00000289272 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 FARP2O94887 1054 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 MYL12AP19105 171 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ACTR3P61158 418 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 NR6A1Q15406 480 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PDGFCQ9NRA1 345 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 FBXO6Q9NRD1 293 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PTGES3LE9PB15 166 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 UGT2B11O75310 529 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 TMEM161BQ8NDZ6 487 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 DQX1Q8TE96 717 aaKnown RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ZBTB45Q96K62 511 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 NMUR2Q9GZQ4 415 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 MID1IP1Q9NPA3 183 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 KLF10Q13118 480 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 GRIK4Q16099 956 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 DRICH1Q6PGQ1 229 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 RIOX2Q8IUF8 465 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PACRGLQ8N7B6 248 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 FAM47BQ8NA70 645 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PSMA8Q8TAA3 256 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 MRPS31Q92665 395 aaKnown RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 SLCO2A1Q92959 643 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 CERS2Q96G23 380 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 FICDQ9BVA6 458 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 RGS14O43566 566 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PEX11AO75192 247 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 CCNE2O96020 404 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 HMBSP08397 361 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 LTA4HP09960 611 aaKnown RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PAX3P23760 479 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 CDC42P60953 191 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ZNF177Q13360 481 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 SUN5Q8TC36 379 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 MAGEB10Q96LZ2 347 aaPredicted RBP17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 PORCNQ9H237 461 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ENTPD7Q9NQZ7 604 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 ABCB10Q9NRK6 738 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 TSPAN16Q9UKR8 245 aa17.71■□□□□ 0.43
PCDHA13-201ENST00000289272 IFRD1O00458 451 aaPredicted RBP17.71■□□□□ 0.42
PCDHA13-201ENST00000289272 CLCN5P51795 746 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms