RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RFX8Q6ZV50 586 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 Q6ZVU0 165 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CEP68Q76N32 757 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 LPCAT2Q7L5N7 544 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CCDC170Q8IYT3 715 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CHST14Q8NCH0 376 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 TMIEQ8NEW7 156 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ZNF564Q8TBZ8 553 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 FAF2Q96CS3 445 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 HMCESQ96FZ2 354 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CCDC42Q96M95 316 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CSPG4P5Q96PW8 444 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 SLC39A8Q9C0K1 460 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MUC3BQ9H195 1237 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 PCDH18Q9HCL0 1135 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 EVLQ9UI08 416 aaPredicted RBP9.34□□□□□ -0.91
HMGN1-201ENST00000288344 MFHAS1Q9Y4C4 1052 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
HMGN1-201ENST00000288344 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PATE3B3GLJ2 98 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 J3KR12 359 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 MID1O15344 667 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 LATO43561 262 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 CREB3O43889 395 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 AKR1B10O60218 316 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PRPSAP2O60256 369 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 GDF9O60383 454 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PRAMEF11O60813 436 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 RAMP2O60895 175 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 GJB3O75712 270 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 HOXD12P35452 270 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ETFBP38117 255 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP25P42331 645 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 LIMK1P53667 647 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ST8SIA6P61647 398 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 IRX4P78413 519 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 POLD3Q15054 466 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 SF3A2Q15428 464 aaKnown RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ELF2Q15723 593 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 CCDC6Q16204 474 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PARP15Q460N3 678 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 AGBL4Q5VU57 503 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 RETSATQ6NUM9 610 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 RWDD4Q6NW29 188 aaKnown RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 RAD9BQ6WBX8 426 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PRR23CQ6ZRP0 262 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 SYT12Q8IV01 421 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 DEFB119Q8N690 84 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 PQLC3Q8N755 202 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 SPON2Q9BUD6 331 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 DHX35Q9H5Z1 703 aaKnown RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 SGK2Q9HBY8 427 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ATP13A1Q9HD20 1204 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 VPS45Q9NRW7 570 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 FBXL12Q9NXK8 326 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 RCOR3Q9P2K3 495 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 FZD4Q9ULV1 537 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 TFR2Q9UP52 801 aa9.33□□□□□ -0.92
HMGN1-201ENST00000288344 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 EPN1Q9Y6I3 576 aaPredicted RBP9.33□□□□□ -0.92
HMGN1-201ENST00000288344 CBX4O00257 560 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PJA2O43164 708 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 SPINT1O43278 529 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 AMPD1P23109 780 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 MAOBP27338 520 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 CHRNA3P32297 505 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 NNMTP40261 264 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PAPOLAP51003 745 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 RPL6Q02878 288 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 SLC10A2Q12908 348 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 DPYSL3Q14195 570 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 IHHQ14623 411 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 CARD16Q5EG05 197 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PIP5KL1Q5T9C9 394 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 LRRC38Q5VT99 294 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 TCEAL6Q6IPX3 200 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 C22orf39Q6P5X5 142 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 DBX2Q6ZNG2 339 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP36Q6ZRI8 547 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 KIAA2013Q8IYS2 634 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PCDH20Q8N6Y1 951 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ATP11CQ8NB49 1132 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 NETO2Q8NC67 525 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ARID1BQ8NFD5 2236 aaPredicted RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PCDH19Q8TAB3 1148 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 RFFLQ8WZ73 363 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 RAPGEF5Q92565 580 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 TCEAL3Q969E4 200 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms