RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GEN1Q17RS7 908 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 TMEM215Q68D42 235 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 HOOK3Q86VS8 718 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 PGBD5Q8N414 524 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 NAT8LQ8N9F0 302 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 TSEN2Q8NCE0 465 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 WFIKKN2Q8TEU8 576 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 EXOC4Q96A65 974 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 TTC17Q96AE7 1141 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 FCRL5Q96RD9 977 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 CINPQ9BW66 212 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 SMAPO00193 183 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 APRTP07741 180 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 POLR2EP19388 210 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 EIF2DP41214 584 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 ANKRD22Q5VYY1 191 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 MBLAC2Q68D91 279 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 GRAMD4Q6IC98 578 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 METTL3Q86U44 580 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 SLC44A3Q8N4M1 653 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 CSGALNACT1Q8TDX6 532 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 GORASP1Q9BQQ3 440 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 POLR1EQ9GZS1 481 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 SHOC2Q9UQ13 582 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 E7EVH7 732 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 F5H423 210 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 MUSKO15146 869 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 TMCC1O94876 653 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 OPRD1P41143 372 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 SERPINH1P50454 418 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 ECT2LQ008S8 904 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 ITKQ08881 620 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 PRPSAP1Q14558 356 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 PRCCQ92733 491 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 CHFRQ96EP1 664 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 PPP1R2P1Q96PQ5 205 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 MGME1Q9BQP7 344 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 SLC25A51Q9H1U9 297 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 VIPAS39Q9H9C1 493 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 TRPV5Q9NQA5 729 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 HS3ST2Q9Y278 367 aa19.21■□□□□ 0.67
PDLIM3-202ENST00000284770 PRUNE2Q8WUY3 3088 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 TCRBV7S3A2A0A539 114 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 IL9P15248 144 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 CTSOP43234 321 aaPredicted RBP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 MAXP61244 160 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 DHX9Q08211 1270 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 SYCP2LQ5T4T6 812 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 ALG1LQ6GMV1 187 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 PHTF2Q8N3S3 785 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 EIF2B3Q9NR50 452 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 SLC25A13Q9UJS0 675 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 AAR2Q9Y312 384 aaKnown RBP19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 UNC80Q8N2C7 3258 aa19.2■□□□□ 0.66
PDLIM3-202ENST00000284770 K7ERQ8 282 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 TPSB2P20231 275 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 CDK16Q00536 496 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 MESP2Q0VG99 397 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 TPSAB1Q15661 275 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 PREPLQ4J6C6 727 aaPredicted RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 KLHDC8BQ8IXV7 354 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ZCCHC9Q8N567 271 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 PDCD7Q8N8D1 485 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ATP11CQ8NB49 1132 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 IMP4Q96G21 291 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 OXNAD1Q96HP4 312 aaPredicted RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 RPL10LQ96L21 214 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 MLPHQ9BV36 600 aaPredicted RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 PRDM6Q9NQX0 595 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 FCF1Q9Y324 198 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 COL4A3Q01955 1670 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 GOLGA6CA6NDK9 693 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 GOLGA6BA6NDN3 693 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ERI2A8K979 691 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 SMAD6O43541 496 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ANXA9O76027 345 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 TMEM63AO94886 807 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ATP5BP06576 529 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 GOLGA6DP0CG33 693 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 LMAN1P49257 510 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 NSUN2Q08J23 767 aaKnown RBP eCLIP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 UAP1Q16222 522 aaPredicted RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 KCTD11Q693B1 232 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 PRPF39Q86UA1 669 aaKnown RBP19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 SH2D3CQ8N5H7 860 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 MCUQ8NE86 351 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 SPATA22Q8NHS9 363 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 ARRDC2Q8TBH0 407 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 PWWP2AQ96N64 755 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 FOXP3Q9BZS1 431 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 GOLGA6AQ9NYA3 693 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 UBP1Q9NZI7 540 aa19.19■□□□□ 0.66
PDLIM3-202ENST00000284770 LOC730098B7Z3J9 87 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 PSMD3O43242 534 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 TIMM44O43615 452 aa19.18■□□□□ 0.66
PDLIM3-202ENST00000284770 AP2A1O95782 977 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms