RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SRGAP2BP0DMP2 458 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 CXCR3P49682 368 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 IDH3AP50213 366 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 CCL23P55773 120 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 FAM171A1Q5VUB5 890 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 SCD5Q86SK9 330 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 TMEM173Q86WV6 379 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 ATAD1Q8NBU5 361 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 EZH1Q92800 747 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 OSER1Q9NX31 292 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 POMPQ9Y244 141 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 A0A1B0GVG6 124 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 PEX2P28328 305 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 PRDX6P30041 224 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 SCAPQ12770 1279 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 MAPRE1Q15691 268 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 LRRC36Q1X8D7 754 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 MMEL1Q495T6 779 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 ANKRD20A4Q4UJ75 823 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 PDPK2PQ6A1A2 396 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 COLGALT1Q8NBJ5 622 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 CASP10Q92851 521 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 LAMA3Q16787 3333 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 A0A0A0MRY4 1105 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 OAZ2O95190 189 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 USP46P62068 366 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 CRADDP78560 199 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 PCLAFQ15004 111 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 PAFAH1B3Q15102 231 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 MAVSQ7Z434 540 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 FBXW8Q8N3Y1 598 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 CELF6Q96J87 481 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 SPATA13Q96N96 652 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 CASD1Q96PB1 797 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 FTHL17Q9BXU8 183 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 ZCWPW1Q9H0M4 648 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 A0A1W2PQH9 124 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 PDE5AO76074 875 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 ALDOAP04075 364 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 CHN2P52757 468 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 NAB1Q13506 487 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 PDK3Q15120 406 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 TRIP10Q15642 601 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 INSCQ1MX18 579 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 ARL13BQ3SXY8 428 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 C16orf46Q6P387 395 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 ZNF567Q8N184 647 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 IRGQQ8WZA9 623 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 CDKL2Q92772 493 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 SORT1Q99523 831 aa18.6■□□□□ 0.57
PDLIM3-201ENST00000284767 ITGAXP20702 1163 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 KCNA4P22459 653 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 PSMB4P28070 264 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 SERPINB6P35237 376 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 NIPAL4Q0D2K0 466 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 DLG1Q12959 904 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 SEMA5AQ13591 1074 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 SMAD1Q15797 465 aaKnown RBP18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 BTBD8Q5XKL5 378 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 RSPO2Q6UXX9 243 aaPredicted RBP18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 ICA1LQ8NDH6 482 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 ADAM28Q9UKQ2 775 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 TPP1O14773 563 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 RAG1P15918 1043 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 GRIA2P42262 883 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 SLC11A1P49279 550 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 DEFB107AQ8IZN7 70 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 MARCH5Q9NX47 278 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 SLC27A5Q9Y2P5 690 aa18.59■□□□□ 0.57
PDLIM3-201ENST00000284767 ZNF195O14628 629 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 MOCS2O96007 188 aaPredicted RBP18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 F9P00740 461 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 MLNP12872 115 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 HARS2P49590 506 aaKnown RBP18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 ITGA9Q13797 1035 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 PDK1Q15118 436 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 LRRC23Q53EV4 343 aaPredicted RBP18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 FSCBQ5H9T9 825 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 RWDD4Q6NW29 188 aaKnown RBP18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 UGT2A3Q6UWM9 527 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 PACS1Q6VY07 963 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 DEFB128Q7Z7B8 93 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 KBTBD6Q86V97 674 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 CCDC124Q96CT7 223 aaKnown RBP18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 PNPOQ9NVS9 261 aa18.58■□□□□ 0.57
PDLIM3-201ENST00000284767 SHROOM3Q8TF72 1996 aa18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 HACD1B0YJ81 288 aa18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 TMEM189-UBE2V1I3L0A0 370 aa18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 ATP9BO43861 1147 aa18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 MTTPP55157 894 aa18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 ABCE1P61221 599 aaKnown RBP18.58■□□□□ 0.56
PDLIM3-201ENST00000284767 TBL3Q12788 808 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms