RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF221Q9UK13 617 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 AXIN2Q9Y2T1 843 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 UGGT1Q9NYU2 1555 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ANKDD1BA6NHY2 528 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PLK4O00444 970 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ZNF208O43345 1280 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 GNRH1P01148 92 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CSH1P0DML2 217 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CSH2P0DML3 217 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 WEE1P30291 646 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 KLK7P49862 253 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TBX4P57082 545 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TAS2R41P59536 307 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 OCLNQ16625 522 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 LRRC69Q6ZNQ3 347 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CD101Q93033 1021 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 C12orf66Q96MD2 445 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PLEKHF1Q96S99 279 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 STOX2Q9P2F5 926 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 SCAF8Q9UPN6 1271 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 TRPM1Q7Z4N2 1603 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ATXN2Q99700 1313 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 TIPRLO75663 272 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PSMG1O95456 288 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -15e-6■■■□□ 17.8
NIPBL-201ENST00000282516 BMT2Q1RMZ1 405 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 SPAG4Q9NPE6 437 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 SOHLH2Q9NX45 425 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FBXL21Q9UKT6 434 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ZMYM2Q9UBW7 1377 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 METTL18O95568 372 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 GPD2P43304 727 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PERM1Q5SV97 790 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 RD3Q7Z3Z2 195 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ZC3H7AQ8IWR0 971 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 ZNF615Q8N8J6 731 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FAM98AQ8NCA5 519 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 TNFAIP8L1Q8WVP5 186 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 A0A0G2JPF8 293 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FAM172BPA6NC97 362 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 HNRNPCL3B7ZW38 293 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 HNRNPCL4P0DMR1 293 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ATP4AP20648 1035 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 SPIBQ01892 262 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 MBTD1Q05BQ5 628 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 BMPR2Q13873 1038 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 POU5F2Q8N7G0 328 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 DNAJA4Q8WW22 397 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 TESCQ96BS2 214 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PNMA5Q96PV4 448 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CLEC4AQ9UMR7 237 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PON1P27169 355 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 QSOX2Q6ZRP7 698 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 COLGALT1Q8NBJ5 622 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CDRT15Q96T59 188 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PRDM16Q9HAZ2 1276 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PSMD13Q9UNM6 376 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 SPEF1Q9Y4P9 236 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PCDHA3Q9Y5H8 950 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 KLRC1P26715 233 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CHST15Q7LFX5 561 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 RAB43Q86YS6 212 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FBXW8Q8N3Y1 598 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ZNF540Q8NDQ6 660 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 TSEN15Q8WW01 171 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 SERPINB11Q96P15 392 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 TARS2Q9BW92 718 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 LEF1Q9UJU2 399 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 HBS1LQ9Y450 684 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 NINQ8N4C6 2090 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FAM86C2PA6NEL3 165 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 URADA6NGE7 173 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 BMP7P18075 431 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 ADIGQ0VDE8 80 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 LSM12Q3MHD2 195 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 FAM92BQ6ZTR7 304 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PACS2Q86VP3 889 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 PYDC1Q8WXC3 89 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 GLT1D1Q96MS3 346 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 AP1S3Q96PC3 154 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 GPER1Q99527 375 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 HGH1Q9BTY7 390 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 TTYH1Q9H313 450 aaPredicted RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 DCXO43602 365 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 UGT2B17O75795 530 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 EPORP19235 508 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 POLR2EP19388 210 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 TUBA4AP68366 448 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 NRF1Q16656 503 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 FNDC3BQ53EP0 1204 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 GPAT3Q53EU6 434 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 WDR49Q8IV35 697 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CCDC54Q8NEL0 328 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms