RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ITM2AO43736 263 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 TBC1D4O60343 1298 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CSF2RAP15509 400 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 TACR2P21452 398 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CNTFP26441 200 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 RENBPP51606 427 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 IHHQ14623 411 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 GRTP1Q5TC63 336 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 LDB1Q86U70 411 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF683Q8IZ20 524 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 PPHLN1Q8NEY8 458 aaKnown RBP18.2■□□□□ 0.5
CAPN1-201ENST00000279247 CYP2S1Q96SQ9 504 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 TRPC7Q9HCX4 862 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
CAPN1-201ENST00000279247 DOCK4Q8N1I0 1966 aa18.2■□□□□ 0.5
CAPN1-201ENST00000279247 FNDC1Q4ZHG4 1894 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 EYSQ5T1H1 3165 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 C2orf78A6NCI8 922 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 F5H5T6 163 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 LIMK2P53671 638 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 STX3Q13277 289 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 GALNTL6Q49A17 601 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 PKN3Q6P5Z2 889 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 CYS1Q717R9 158 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 ALYREFQ86V81 257 aaKnown RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 GPATCH11Q8N954 259 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 OR52K2Q8NGK3 314 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 VWCEQ96DN2 955 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 UXTQ9UBK9 157 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 GREB1Q4ZG55 1949 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 PRRG1O14668 218 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 AURKAO14965 403 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 GLRA3O75311 464 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 GLDCP23378 1020 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 HNRNPH1P31943 449 aaKnown RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 USP10Q14694 798 aaKnown RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 PCID2Q5JVF3 399 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF470Q6ECI4 717 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 CYB5D1Q6P9G0 228 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 SLC41A1Q8IVJ1 513 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 UMODL1-AS1Q8N2C9 162 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 CRISPLD2Q9H0B8 497 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 KLC4Q9NSK0 619 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 TMEM248Q9NWD8 314 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 IL37Q9NZH6 218 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 BAIAP2L1Q9UHR4 511 aa18.19■□□□□ 0.5
CAPN1-201ENST00000279247 ZFP37Q9Y6Q3 630 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-201ENST00000279247 A8MUI8 341 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 PLIN3O60664 434 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 DCTN3O75935 186 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 HSPA1AP0DMV8 641 aaKnown RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 HSPA1BP0DMV9 641 aaKnown RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 ITGA9Q13797 1035 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 PTPRCAPQ14761 206 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 GBP7Q8N8V2 638 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 SEMA3CQ99985 751 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 TMEM175Q9BSA9 504 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 CWH43Q9H720 699 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 FAM92AA1XBS5 289 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 COCHO43405 550 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 PEX11BO96011 259 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 C2P06681 752 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 HARS2P49590 506 aaKnown RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 PSEN1P49768 467 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 THOC5Q13769 683 aaKnown RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 PGBD5Q8N414 524 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 WBP2Q969T9 261 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 RILPQ96NA2 401 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 DNMT3LQ9UJW3 386 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 FNDC3AQ9Y2H6 1198 aaKnown RBP18.18■□□□□ 0.5
CAPN1-201ENST00000279247 KCTD3Q9Y597 815 aa18.18■□□□□ 0.5
CAPN1-201ENST00000279247 DNAJC8O75937 253 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 AHSGP02765 367 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SGSHP51688 502 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 AQP5P55064 265 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 HNRNPDQ14103 355 aaKnown RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 ZNF235Q14590 738 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 OTOP2Q7RTS6 562 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 ANKRD33Q7Z3H0 272 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 PTAR1Q7Z6K3 402 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 OR6P1Q8NGX9 317 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 RNF38Q9H0F5 515 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 KCNK13Q9HB14 408 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 MTRRQ9UBK8 725 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 MAGEB16A2A368 324 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 TRIM43BA6NCK2 446 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 KRT16P08779 473 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 DLDP09622 509 aaKnown RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 GABRB3P28472 473 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 GALNT3Q14435 633 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 AFMIDQ63HM1 303 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 TIFABQ6ZNK6 161 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 TRIM43Q96BQ3 446 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SCYL1Q96KG9 808 aa18.17■□□□□ 0.5
CAPN1-201ENST00000279247 SPATA17Q96L03 361 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms