RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TMEM216Q9P0N5 145 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 CEP350Q5VT06 3117 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 HEATR9A2RTY3 570 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 EME2A4GXA9 379 aaPredicted RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PSMG1O95456 288 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 NFKBIAP25963 317 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 SERPINH1P50454 418 aaKnown RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PURAQ00577 322 aaKnown RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 BANPQ8N9N5 519 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 DDX50Q9BQ39 737 aaKnown RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 KATNA1O75449 491 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 CSF2RAP15509 400 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 ACADSP16219 412 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 IVDP26440 423 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 FMO4P31512 558 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 FBXO48Q5FWF7 155 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PLPP4Q5VZY2 271 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 SCIMPQ6UWF3 145 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 GSTCDQ8NEC7 633 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
TMEM47-201ENST00000275954 CYGBQ8WWM9 190 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 ARNTL2Q8WYA1 636 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 RSPH1Q8WYR4 309 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 APBB2Q92870 758 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 HDAC10Q969S8 669 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PPP1R2P1Q96PQ5 205 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 MID1IP1Q9NPA3 183 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 PIGVQ9NUD9 493 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 ORC6Q9Y5N6 252 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 COL1A2P08123 1366 aa14.53□□□□□ -0.08
TMEM47-201ENST00000275954 OR1D2P34982 312 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 RHOAP61586 193 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 PLOD1Q02809 727 aaPredicted RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 ZNF252P-AS1Q0IIN9 211 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 TRIM54Q9BYV2 358 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 ADAM7Q9H2U9 754 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 DENND2DQ9H6A0 471 aaPredicted RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 SCUBE2Q9NQ36 999 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 LRG1P02750 347 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 PFKFB4Q16877 469 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 OLFML1Q6UWY5 402 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 RIPOR1Q6ZS17 1223 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 TMEM110Q86TL2 294 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 TAC4Q86UU9 113 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 RBM15BQ8NDT2 890 aaKnown RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 SLC35F5Q8WV83 523 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 ZNF333Q96JL9 665 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 HNRNPABQ99729 332 aaKnown RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 TM6SF2Q9BZW4 377 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 ASXL3Q9C0F0 2248 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 DRC3Q9H069 523 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 BRD8Q9H0E9 1235 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 AGO3Q9H9G7 860 aaKnown RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 UXTQ9UBK9 157 aaPredicted RBP14.52□□□□□ -0.08
TMEM47-201ENST00000275954 DERAQ9Y315 318 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 PCDHB12Q9Y5F1 795 aa14.52□□□□□ -0.08
TMEM47-201ENST00000275954 ARL5CA6NH57 179 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 GSC2O15499 205 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 PFDN1O60925 122 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 CYBBP04839 570 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 TSHRP16473 764 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 RPL14P50914 215 aaKnown RBP14.52□□□□□ -0.09
TMEM47-201ENST00000275954 KCNK10P57789 538 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 ENPEPQ07075 957 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 CCDC85BQ15834 202 aaPredicted RBP14.52□□□□□ -0.09
TMEM47-201ENST00000275954 TIGD5Q53EQ6 642 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 TDRPQ86YL5 185 aa14.52□□□□□ -0.09
TMEM47-201ENST00000275954 QKIQ96PU8 341 aaKnown RBP eCLIP14.52□□□□□ -0.09
TMEM47-201ENST00000275954 A0A1W2PQH9 124 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 VPS26AO75436 327 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 USP1O94782 785 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 CHRNA4P43681 627 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 TUSC3Q13454 348 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 BIRC2Q13490 618 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 ZNF460Q14592 562 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 SPRED3Q2MJR0 410 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 NOMO2Q5JPE7 1267 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 LRRC8BQ6P9F7 803 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 DCUN1D1Q96GG9 259 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 SLC4A5Q9BY07 1137 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 BPIFA1Q9NP55 256 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 CACNA1GO43497 2377 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 TK2O00142 265 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 HIST1H2AGP0C0S8 130 aaPredicted RBP14.51□□□□□ -0.09
TMEM47-201ENST00000275954 TFEBP19484 476 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 HIST1H2ADP20671 130 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 DAOAP59103 153 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 HIST1H2AHQ96KK5 128 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 HIST1H2AJQ99878 128 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 H2AFJQ9BTM1 129 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 A0A1W2PQ45 241 aaPredicted RBP14.51□□□□□ -0.09
TMEM47-201ENST00000275954 A0A1W2PQY0 241 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 C9IYK1 514 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 NRP1O14786 923 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 MPSTP25325 297 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 CDK7P50613 346 aa14.51□□□□□ -0.09
TMEM47-201ENST00000275954 GJA9P57773 515 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms