RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ABI3BPQ7Z7G0 1075 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 PRPF39Q86UA1 669 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 XYLT1Q86Y38 959 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 CCDC117Q8IWD4 279 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 FAM71AQ8IYT1 594 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 HPS1Q92902 700 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 NXPE2Q96DL1 559 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 PGAP3Q96FM1 320 aaPredicted RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 BMFQ96LC9 184 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 NRSN2Q9GZP1 204 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 PREBQ9HCU5 417 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 NDFIP2Q9NV92 336 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 HOOK1Q9UJC3 728 aaKnown RBP9.16□□□□□ -0.94
TPM3-201ENST00000271850 SLC25A13Q9UJS0 675 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 TMEM59LQ9UK28 342 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 FHOD1Q9Y613 1164 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
TPM3-201ENST00000271850 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 POM121BA6NF01 834 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 C1QTNF3-AMACRE9PGA6 284 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 PRAMEF26H0Y7S4 382 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 LEFTY1O75610 366 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 PIAS2O75928 621 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 ENDOD1O94919 500 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 SLC2A3P11169 496 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 SULT1E1P49888 294 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 OVGP1Q12889 678 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 ILKQ13418 452 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 CAMK4Q16566 473 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 SETMARQ53H47 684 aaPredicted RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 ZNF542PQ5EBM4 170 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 C6orf118Q5T5N4 469 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 FAM46CQ5VWP2 391 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 GBP6Q6ZN66 633 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 NOP9Q86U38 636 aaKnown RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 HORMAD1Q86X24 394 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 OXR1Q8N573 874 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 DCAF4L2Q8NA75 395 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 ZSCAN1Q8NBB4 408 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 TMIEQ8NEW7 156 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 OR4C6Q8NH72 309 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 GRIN3AQ8TCU5 1115 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 RNF34Q969K3 372 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 SKA1Q96BD8 255 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 KLF6Q99612 283 aaPredicted RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 MUC3BQ9H195 1237 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 KLHL11Q9NVR0 708 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 SLC12A6Q9UHW9 1150 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 GGT7Q9UJ14 662 aa9.15□□□□□ -0.94
TPM3-201ENST00000271850 TPX2Q9ULW0 747 aaKnown RBP9.15□□□□□ -0.94
TPM3-201ENST00000271850 TENM4Q6N022 2769 aa9.15□□□□□ -0.95
TPM3-201ENST00000271850 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.95
TPM3-201ENST00000271850 FLNBO75369 2602 aaKnown RBP9.15□□□□□ -0.95
TPM3-201ENST00000271850 TRPM6Q9BX84 2022 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 PMS2P1A4D2B8 440 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 KPNA3O00505 521 aaPredicted RBP9.14□□□□□ -0.95
TPM3-201ENST00000271850 FFAR2O15552 330 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 NEBLO76041 1014 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 GJB6O95452 261 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 MT-CO3P00414 261 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 RHOCP08134 193 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 CYP11B1P15538 503 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 GKP32189 559 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 HNF1BP35680 557 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 NUDT1P36639 197 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 ACVRL1P37023 503 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 NNMTP40261 264 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 ABL2P42684 1182 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 OXCT1P55809 520 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 RNASE9P60153 205 aaKnown RBP9.14□□□□□ -0.95
TPM3-201ENST00000271850 TLE3Q04726 772 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 FZD2Q14332 565 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 STAT4Q14765 748 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 HSP90AA4PQ58FG1 418 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 BRMS1LQ5PSV4 323 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 MANEALQ5VSG8 457 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 ERN2Q76MJ5 926 aaKnown RBP9.14□□□□□ -0.95
TPM3-201ENST00000271850 PARS2Q7L3T8 475 aaKnown RBP9.14□□□□□ -0.95
TPM3-201ENST00000271850 DSG4Q86SJ6 1040 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 SETD3Q86TU7 594 aaPredicted RBP9.14□□□□□ -0.95
TPM3-201ENST00000271850 ATP11CQ8NB49 1132 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 KLHDC7BQ96G42 594 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 CFAP57Q96MR6 1250 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 HDAC8Q9BY41 377 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 WDCPQ9H6R7 721 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.14□□□□□ -0.95
TPM3-201ENST00000271850 CLCA2Q9UQC9 943 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 ITM2BQ9Y287 266 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 FADS3Q9Y5Q0 445 aa9.14□□□□□ -0.95
TPM3-201ENST00000271850 FAM72CH0Y354 149 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 CDK4P11802 303 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 CKMT1AP12532 417 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms