RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
SS18-202ENST00000269138 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 OR8D1Q8WZ84 308 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
SS18-202ENST00000269138 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 HECAQ9UBI9 543 aaPredicted RBP12.97□□□□□ -0.33
SS18-202ENST00000269138 PPM1HQ9ULR3 514 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 CYP8B1Q9UNU6 501 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 WASF2Q9Y6W5 498 aa12.97□□□□□ -0.33
SS18-202ENST00000269138 TCRBV7S2A1N4TA0A589 114 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 LILRB5O75023 590 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 GSRP00390 522 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 IL1BP01584 269 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 MX2P20592 715 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 BCKDHBP21953 392 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 TGM2P21980 687 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 SLC8A1P32418 973 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 P2RY2P41231 377 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 RECQLP46063 649 aaPredicted RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 FAM124AQ86V42 546 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 PLPP6Q8IY26 295 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 PGBD5Q8N414 524 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 OR2AP1Q8NGE2 309 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 PIP4K2CQ8TBX8 421 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 GRIN3AQ8TCU5 1115 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 NSMCE3Q96MG7 304 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 ZNF599Q96NL3 588 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 HEPHQ9BQS7 1158 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 SERGEFQ9UGK8 458 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 EVLQ9UI08 416 aaPredicted RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 MBD1Q9UIS9 605 aaPredicted RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.33
SS18-202ENST00000269138 FARP1Q9Y4F1 1045 aaPredicted RBP12.96□□□□□ -0.33
SS18-202ENST00000269138 KRIT1O00522 736 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 KCNK3O14649 394 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 ENC1O14682 589 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 MATN3O15232 486 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 ALOX15BO15296 676 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 LEFTY1O75610 366 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 ACADMP11310 421 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 CCNCP24863 283 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 CETN2P41208 172 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 TPMTP51580 245 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 PPIDQ08752 370 aaKnown RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 RFTN1Q14699 578 aaPredicted RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 PDK1Q15118 436 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 AADATQ8N5Z0 425 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 MAML1Q92585 1016 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 P3H4Q92791 437 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 ARRDC3Q96B67 414 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 CCDC114Q96M63 670 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 CINPQ9BW66 212 aaPredicted RBP12.95□□□□□ -0.34
SS18-202ENST00000269138 ZDHHC6Q9H6R6 413 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 SEPT3Q9UH03 358 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
SS18-202ENST00000269138 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 A0A1W2PP55 124 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 KCNK1O00180 336 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 KIF5CO60282 957 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 POP4O95707 220 aaKnown RBP12.94□□□□□ -0.34
SS18-202ENST00000269138 IGSF6O95976 241 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 DNTTP04053 509 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 CCNB1P14635 433 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 NR2C2P49116 596 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 MAXP61244 160 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 OTUD4Q01804 1114 aaKnown RBP12.94□□□□□ -0.34
SS18-202ENST00000269138 ZBTB16Q05516 673 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 AP1B1Q10567 949 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 MARC1Q5VT66 337 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 DSG4Q86SJ6 1040 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 SRLQ86TD4 932 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 ZC3H18Q86VM9 953 aaKnown RBP12.94□□□□□ -0.34
SS18-202ENST00000269138 TEX26Q8N6G2 289 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 TMIEQ8NEW7 156 aa12.94□□□□□ -0.34
SS18-202ENST00000269138 ACTL9Q8TC94 416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms