RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 FBF1Q8TES7 1133 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 ING5Q8WYH8 240 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 CFAP36Q96G28 342 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 XPO6Q96QU8 1125 aaKnown RBP14.33□□□□□ -0.12
SS18-201ENST00000269137 CYTH2Q99418 400 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 POLR1EQ9GZS1 481 aaKnown RBP14.33□□□□□ -0.12
SS18-201ENST00000269137 NSUN3Q9H649 340 aaKnown RBP14.33□□□□□ -0.12
SS18-201ENST00000269137 EURLQ9NYK6 297 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 VPS18Q9P253 973 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 CDH23Q9H251 3354 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 CBX4O00257 560 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 PENKP01210 267 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 MMP2P08253 660 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 PGAM1P18669 254 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 GLDCP23378 1020 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 GCAP28676 217 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 CBX2Q14781 532 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 SLC14A2Q15849 920 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 EMC10Q5UCC4 262 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 ARMC3Q5W041 872 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 RANBP10Q6VN20 620 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 GPR149Q86SP6 731 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 CELF5Q8N6W0 485 aaKnown RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 IPMKQ8NFU5 416 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 WFDC5Q8TCV5 224 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 MRGPRX2Q96LB1 330 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 MGME1Q9BQP7 344 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 IL22Q9GZX6 179 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 ARNT2Q9HBZ2 717 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 KIAA1522Q9P206 1035 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 BCCIPQ9P287 314 aaKnown RBP eCLIP14.32□□□□□ -0.12
SS18-201ENST00000269137 C2orf16Q68DN1 1984 aa14.32□□□□□ -0.12
SS18-201ENST00000269137 NUP210Q8TEM1 1887 aaPredicted RBP14.32□□□□□ -0.12
SS18-201ENST00000269137 CXorf51AA0A1B0GTR3 108 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SMIM23A6NLE4 172 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 MUSKO15146 869 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 PMPCBO75439 489 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 GLP2RO95838 553 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 C1QAP02745 245 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CES1P23141 567 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 PRKCHP24723 683 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CSKP41240 450 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 PLK1P53350 603 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 WNT3AP56704 352 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 GEMIN4P57678 1058 aaKnown RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 MAXP61244 160 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 ARF5P84085 180 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 DSC2Q02487 901 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 ITKQ08881 620 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 HYAL1Q12794 435 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SLC12A1Q13621 1099 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 DENND5AQ6IQ26 1287 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CASC4Q6P4E1 433 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 LEKR1Q6ZMV7 388 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 TPGS1Q6ZTW0 290 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SH2D3CQ8N5H7 860 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.31□□□□□ -0.12
SS18-201ENST00000269137 FAM76AQ8TAV0 307 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 DHRS4Q9BTZ2 278 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 IGFLR1Q9H665 355 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 PIH1D1Q9NWS0 290 aaKnown RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 NOVA2Q9UNW9 492 aaKnown RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 ALDH1A2O94788 518 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CD160O95971 181 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 FSHRP23945 695 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CD86P42081 329 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CRADDP78560 199 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SKOR1P84550 965 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 IHHQ14623 411 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 CYTH1Q15438 398 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 RARS2Q5T160 578 aaKnown RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 ZNF557Q8N988 423 aaPredicted RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 IRF7Q92985 503 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 BHMTQ93088 406 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 ACDQ96AP0 544 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 LMLNQ96KR4 655 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SEMA3CQ99985 751 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 FICDQ9BVA6 458 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 C2orf49Q9BVC5 232 aaPredicted RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 CINPQ9BW66 212 aaPredicted RBP14.31□□□□□ -0.12
SS18-201ENST00000269137 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 MOCS1Q9NZB8 636 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 SAMD15Q9P1V8 674 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 MYOFQ9NZM1 2061 aa14.31□□□□□ -0.12
SS18-201ENST00000269137 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
SS18-201ENST00000269137 SNAP91O60641 907 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms