RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
BEST3-201ENST00000266661 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
BEST3-201ENST00000266661 CSNK1G1Q9HCP0 422 aa12.64□□□□□ -0.39
BEST3-201ENST00000266661 SPATS2LQ9NUQ6 558 aaKnown RBP12.64□□□□□ -0.39
BEST3-201ENST00000266661 NSMCE4AQ9NXX6 385 aa12.64□□□□□ -0.39
BEST3-201ENST00000266661 STK39Q9UEW8 545 aa12.64□□□□□ -0.39
BEST3-201ENST00000266661 TK2O00142 265 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 AP3B1O00203 1094 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PSMD3O43242 534 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 AP1G2O75843 785 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 LRIG2O94898 1065 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 F9P00740 461 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 GNRH1P01148 92 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 JCHAINP01591 159 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 AHSGP02765 367 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 RAG1P15918 1043 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 VCLP18206 1134 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 TFEBP19484 476 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ARNTP27540 789 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 CCND3P30281 292 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 CCR10P46092 362 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 GRIA4P48058 902 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ARCN1P48444 511 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 RPL14P50914 215 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 CACNB2Q08289 660 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 CDH17Q12864 832 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 IRF5Q13568 498 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 HERC3Q15034 1050 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ARL13AQ5H913 290 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 DCLRE1AQ6PJP8 1040 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 RP9Q8TA86 221 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 LENG1Q96BZ8 264 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 ZNF419Q96HQ0 510 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 BTBD9Q96Q07 612 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 DDIT4Q9NX09 232 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 ZDHHC2Q9UIJ5 367 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PGK1P00558 417 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 INHAP05111 366 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 USP17L7P0C7H9 530 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 NCAM1P13591 858 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 POLD2P49005 469 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PSEN2P49810 448 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 AQP4P55087 323 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 ZNF423Q2M1K9 1284 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PIGGQ5H8A4 983 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 TCHHL1Q5QJ38 904 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PKN3Q6P5Z2 889 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 OTOP3Q7RTS5 596 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 TICAM1Q8IUC6 712 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 MFN1Q8IWA4 741 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 CCDC117Q8IWD4 279 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 SCML4Q8N228 414 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 TMEM86AQ8N2M4 240 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 CCDC124Q96CT7 223 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 MAELQ96JY0 434 aaKnown RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 OSBPL2Q9H1P3 480 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.63□□□□□ -0.39
BEST3-201ENST00000266661 CACNG4Q9UBN1 327 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 OR12D3Q9UGF7 316 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 SLC39A10Q9ULF5 831 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 PSMD13Q9UNM6 376 aa12.63□□□□□ -0.39
BEST3-201ENST00000266661 MEIS3P2A8K0S8 358 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 DLX3O60479 287 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 PIGNO95427 931 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 IGHA2P01877 340 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
BEST3-201ENST00000266661 SERPINB6P35237 376 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 ADRA1AP35348 466 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 GRIA2P42262 883 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 LHX1P48742 406 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 PGGT1BP53609 377 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 DLG1Q12959 904 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 PRKAA1Q13131 559 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 ARL13BQ3SXY8 428 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 UGT2A3Q6UWM9 527 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 SNX32Q86XE0 403 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 DSELQ8IZU8 1212 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
BEST3-201ENST00000266661 KDM1BQ8NB78 822 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 KCTD4Q8WVF5 259 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 FCRL5Q96RD9 977 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 IL12RB2Q99665 862 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 EPAS1Q99814 870 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms