RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 HCFC1R1Q9NWW0 138 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SLC17A6Q9P2U8 582 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SOX13Q9UN79 622 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SMG5Q9UPR3 1016 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GRXCR1A8MXD5 290 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TRIM49D1C9J1S8 452 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 NDUFAB1O14561 156 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TYROBPO43914 113 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TBL1XO60907 577 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 RFPL2O75678 378 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 KRT38O76015 456 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MMP2P08253 660 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SNRPAP09012 282 aaKnown RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ERVK-10P10266 1014 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 CA4P22748 312 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GLDCP23378 1020 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 RPA3P35244 121 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SLC7A9P82251 487 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 MGAT5Q09328 741 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 NAB1Q13506 487 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ZSCAN26Q16670 478 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 RANBP10Q6VN20 620 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 GDAP1Q8TB36 358 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 SGSM3Q96HU1 749 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 CCDC134Q9H6E4 229 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ATP13A1Q9HD20 1204 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 VPS45Q9NRW7 570 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 CFAP97Q9P2B7 532 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 TBC1D30Q9Y2I9 924 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
SCAF11-201ENST00000266589 ZCWPW2A0A1B0GU75 182 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 H0Y626 953 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 MUSKO15146 869 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 KDELR3O43731 214 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 FAM107AO95990 144 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 C1RP00736 705 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CA3P07451 260 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CCR2P41597 374 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CHRNA4P43681 627 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 SERPINB9P50453 376 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 SLC18A1P54219 525 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CAMK1Q14012 370 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 POU6F1Q14863 301 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 C9orf50Q5SZB4 431 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 RNF219Q5W0B1 726 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 FAM109BQ6ICB4 259 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CXorf57Q6NSI4 855 aaKnown RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CARNMT1Q8N4J0 409 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 HJURPQ8NCD3 748 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 ARRDC2Q8TBH0 407 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 ALKBH8Q96BT7 664 aaKnown RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CCT8L2Q96SF2 557 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 SEMA3CQ99985 751 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 KIFC1Q9BW19 673 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-201ENST00000266589 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 ACTL7AQ9Y615 435 aa11.73□□□□□ -0.53
SCAF11-201ENST00000266589 CCDC78A2IDD5 438 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 RB1P06400 928 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 NMBRP28336 390 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 FRG1Q14331 258 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 IHHQ14623 411 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PCID2Q5JVF3 399 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PACS1Q6VY07 963 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CCDC117Q8IWD4 279 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 BBS5Q8N3I7 341 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 SLC25A41Q8N5S1 370 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 BANPQ8N9N5 519 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PPHLN1Q8NEY8 458 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 TMA16Q96EY4 203 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CHMP6Q96FZ7 201 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF778Q96MU6 729 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PAIP2Q9BPZ3 127 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CINPQ9BW66 212 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 SLC46A2Q9BY10 475 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ACE2Q9BYF1 805 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CBX4O00257 560 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 GFRA2O00451 464 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CLASP2O75122 1294 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 GJB3O75712 270 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ZWINTO95229 277 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PYGBP11216 843 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 EPCAMP16422 314 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 CNTFP26441 200 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 FSCBQ5H9T9 825 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 MROH9Q5TGP6 573 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms