RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KRT3P12035 628 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 SDC4P31431 198 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 RFC1P35251 1148 aaPredicted RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 PTPN9P43378 593 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 HDAC4P56524 1084 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 GSCP56915 257 aaPredicted RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 MYL5Q02045 173 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 GNA12Q03113 381 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 UBXN1Q04323 297 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 BNIP3Q12983 259 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 STAT4Q14765 748 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 NCAPHQ15003 741 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 CDO1Q16878 200 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ZNF284Q2VY69 593 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 INAVAQ3KP66 663 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 SETMARQ53H47 684 aaPredicted RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 MANEALQ5VSG8 457 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 STRADAQ7RTN6 431 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 APTXQ7Z2E3 356 aaKnown RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 NLRP14Q86W24 1093 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 PHF13Q86YI8 300 aaPredicted RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 TMEM145Q8NBT3 493 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ANKRD20A12PQ8NF67 263 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 JOSD2Q8TAC2 188 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ARRDC3Q96B67 414 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ERGIC2Q96RQ1 377 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 HDAC8Q9BY41 377 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 CEP44Q9C0F1 390 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 HSD3B7Q9H2F3 369 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ATP13A1Q9HD20 1204 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ADAM22Q9P0K1 906 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 IL36AQ9UHA7 158 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ZZEF1O43149 2961 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 AKAP13Q12802 2813 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 A0A1W2PQU0 124 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FAM72CH0Y354 149 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 SLC31A1O15431 190 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 MAGEC1O60732 1142 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 LEFTY1O75610 366 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 LRIG2O94898 1065 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 CD160O95971 181 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 PLEKP08567 350 aaPredicted RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 RHOQP17081 205 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 EPHA8P29322 1005 aaPredicted RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 ACVRL1P37023 503 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 ETFBP38117 255 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 RECQLP46063 649 aaPredicted RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 NSFP46459 744 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 ARF5P84085 180 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 SMAD1Q15797 465 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 STX1AQ16623 288 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 CARD16Q5EG05 197 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FAM72AQ5TYM5 149 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FAM72DQ6L9T8 149 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 RWDD4Q6NW29 188 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 WDR59Q6PJI9 974 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 ERN2Q76MJ5 926 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 KANSL1Q7Z3B3 1105 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 HORMAD1Q86X24 394 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FAM72BQ86X60 149 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 PROSER1Q86XN7 944 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 MARCH9Q86YJ5 346 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 GALNT15Q8N3T1 639 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 OXR1Q8N573 874 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 PCDH20Q8N6Y1 951 aaKnown RBP9.92□□□□□ -0.82
VPS41-201ENST00000265745 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 GRIN3AQ8TCU5 1115 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 HEPHQ9BQS7 1158 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 DYRK4Q9NR20 520 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 FKBPLQ9UIM3 349 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 NEU3Q9UQ49 428 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 ACTL7AQ9Y615 435 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 WASF2Q9Y6W5 498 aa9.92□□□□□ -0.82
VPS41-201ENST00000265745 TCRBV5S1A1TA0A578 114 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 SIGLEC16A6NMB1 481 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 GOLGA6L22H0YM25 854 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 ENC1O14682 589 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 LDOC1O95751 146 aaPredicted RBP9.91□□□□□ -0.82
VPS41-201ENST00000265745 CALB1P05937 261 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 C1SP09871 688 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 PRLRP16471 622 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 MAPKAPK2P49137 400 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 DNA2P51530 1060 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 CCDC157Q569K6 752 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 SFMBT2Q5VUG0 894 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 DHRS13Q6UX07 377 aa9.91□□□□□ -0.82
VPS41-201ENST00000265745 MON1BQ7L1V2 547 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms