RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OTOP3Q7RTS5 596 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 CTU1Q7Z7A3 348 aaKnown RBP16.52■□□□□ 0.23
CTCF-201ENST00000264010 FAM72BQ86X60 149 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.23
CTCF-201ENST00000264010 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.23
CTCF-201ENST00000264010 OSBPL2Q9H1P3 480 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 DDX28Q9NUL7 540 aaKnown RBP16.52■□□□□ 0.23
CTCF-201ENST00000264010 PDP2Q9P2J9 529 aa16.52■□□□□ 0.23
CTCF-201ENST00000264010 A0A1B0GVG6 124 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MYADML2A6NDP7 307 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 DHRS4L1P0CG22 281 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 EIF2B2P49770 351 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 GALNT2Q10471 571 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 STXBP5Q5T5C0 1151 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MON1AQ86VX9 555 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 LRGUKQ96M69 825 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 LNPEPQ9UIQ6 1025 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 SLC12A8A0AV02 714 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 SERPINA6P08185 405 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MYL4P12829 197 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 YWHAQP27348 245 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 GJA8P48165 433 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 FAM83EQ2M2I3 478 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 NUP93Q8N1F7 819 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 TDRD5Q8NAT2 981 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 ICA1LQ8NDH6 482 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 ATXN3LQ9H3M9 355 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 DNAAF2Q9NVR5 837 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 COPG2Q9UBF2 871 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 CITO14578 2027 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 GSC2O15499 205 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MSI1O43347 362 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 C2P06681 752 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 ETFBP38117 255 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 ETV4P43268 484 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 UPP1Q16831 310 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 SCAMP5Q8TAC9 235 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 DCUN1D5Q9BTE7 237 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 ZC4H2Q9NQZ6 224 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 SIRPGQ9P1W8 387 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 PCDHB8Q9UN66 801 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 SOX13Q9UN79 622 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 CA12O43570 354 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 CRABP2P29373 138 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 PTDSS1P48651 473 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 TRMT5Q32P41 509 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 POTEHQ6S545 545 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 TNS4Q8IZW8 715 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 MZB1Q8WU39 189 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 HAPLN3Q96S86 360 aa16.51■□□□□ 0.23
CTCF-201ENST00000264010 AGO3Q9H9G7 860 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 TDRKHQ9Y2W6 561 aaKnown RBP16.51■□□□□ 0.23
CTCF-201ENST00000264010 PHGDHO43175 533 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 ZNF623O75123 536 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 SEL1L3Q68CR1 1132 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 PAQR9Q6ZVX9 377 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 TLR8Q9NR97 1041 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 OLA1Q9NTK5 396 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 HEATR9A2RTY3 570 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 IRAK2O43187 625 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 OR4Q2P0C623 313 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 CCR3P51677 355 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 CBX3Q13185 183 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 ZNF470Q6ECI4 717 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 PKN3Q6P5Z2 889 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 ASRGL1Q7L266 308 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 RHOJQ9H4E5 214 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 EML4Q9HC35 981 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 WARS2Q9UGM6 360 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 SSX2IPQ9Y2D8 614 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 A0A1W2PQH9 124 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 SLCO1B7G3V0H7 640 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 CHRNA1P02708 482 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 SLC4A1P02730 911 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 DLDP09622 509 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 RPL34P49207 117 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 ADAM17P78536 824 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 KPNB1Q14974 876 aaKnown RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 AGAP9Q5VTM2 703 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 C11orf84Q9BUA3 381 aaPredicted RBP16.5■□□□□ 0.23
CTCF-201ENST00000264010 KLHL25Q9H0H3 589 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 CAB39LQ9H9S4 337 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 STARD7Q9NQZ5 370 aa16.5■□□□□ 0.23
CTCF-201ENST00000264010 ALDH2P05091 517 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 STX1BP61266 288 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 RPS6KA2Q15349 733 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 DNAJC1Q96KC8 554 aaKnown RBP16.49■□□□□ 0.23
CTCF-201ENST00000264010 SUSD3Q96L08 255 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms