RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CLCN6P51797 869 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 COPS2P61201 443 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 TCF15Q12870 199 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 E2F5Q15329 346 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 DPY19L3Q6ZPD9 716 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 BBS12Q6ZW61 710 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 TMPRSS6Q8IU80 811 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 MMAAQ8IVH4 418 aaKnown RBP18.65■□□□□ 0.58
SDF4-201ENST00000263741 RYBPQ8N488 228 aaPredicted RBP18.65■□□□□ 0.58
SDF4-201ENST00000263741 RLN3Q8WXF3 142 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 OLFM3Q96PB7 478 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 LHX3Q9UBR4 397 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 PRDM4Q9UKN5 801 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 THADAQ6YHU6 1953 aa18.65■□□□□ 0.58
SDF4-201ENST00000263741 MUSKO15146 869 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 ATP1A1P05023 1023 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 GEMIN4P57678 1058 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 RHOAP61586 193 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 CCDC181Q5TID7 509 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 ADAT2Q7Z6V5 191 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 RASSF3Q86WH2 238 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 FRMD1Q8N878 549 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 TSEN2Q8NCE0 465 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 UBXN4Q92575 508 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 FAM129BQ96TA1 746 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 CEP41Q9BYV8 373 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 C10orf88Q9H8K7 445 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 FBXO4Q9UKT5 387 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 DOCK9Q9BZ29 2069 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 TTC24A2A3L6 582 aaPredicted RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 CTSLP07711 333 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 ZFXP17010 805 aaPredicted RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 PTPN7P35236 360 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 CCNHP51946 323 aaPredicted RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 SLC20A2Q08357 652 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 ELAVL3Q14576 367 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 ZC3H18Q86VM9 953 aaKnown RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 CAMKK1Q8N5S9 505 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 FAM160A2Q8N612 972 aaPredicted RBP18.64■□□□□ 0.57
SDF4-201ENST00000263741 CEP44Q9C0F1 390 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 PRDM16Q9HAZ2 1276 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 SARDHQ9UL12 918 aa18.64■□□□□ 0.57
SDF4-201ENST00000263741 TARSL2A2RTX5 802 aaKnown RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 KCNK1O00180 336 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 PLK4O00444 970 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 AXIN1O15169 862 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 ALDH1A2O94788 518 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 TGM2P21980 687 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 MAXP61244 160 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 RPS14P62263 151 aaKnown RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 AP1B1Q10567 949 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 LBRQ14739 615 aaKnown RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 TMCO4Q5TGY1 634 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.63■□□□□ 0.57
SDF4-201ENST00000263741 PCDH20Q8N6Y1 951 aaKnown RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 P3H4Q92791 437 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 HDAC11Q96DB2 347 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 WDR24Q96S15 920 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 CINPQ9BW66 212 aaPredicted RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 RSPH9Q9H1X1 276 aaPredicted RBP18.63■□□□□ 0.57
SDF4-201ENST00000263741 ZDHHC6Q9H6R6 413 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 EBF1Q9UH73 591 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 R4GN57 208 aa18.63■□□□□ 0.57
SDF4-201ENST00000263741 INSIG1O15503 277 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 URI1O94763 535 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 IL1BP01584 269 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 H2AFXP16104 143 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 CASQ1P31415 396 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 GNG11P61952 73 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 OTUD4Q01804 1114 aaKnown RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 SEL1L2Q5TEA6 688 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 PGBD5Q8N414 524 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 ACTL9Q8TC94 416 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 OR8D1Q8WZ84 308 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 SIPA1Q96FS4 1042 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 FAM86C1Q9NVL1 165 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 EVLQ9UI08 416 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 TTLL3Q9Y4R7 772 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 EFCAB8A8MWE9 144 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 MID1O15344 667 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 MX2P20592 715 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 CETN2P41208 172 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 RECQLP46063 649 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 PPIDQ08752 370 aaKnown RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 ZNF235Q14590 738 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 INO80DQ53TQ3 878 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 CARD16Q5EG05 197 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 ZNF776Q68DI1 518 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 OR2AP1Q8NGE2 309 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 PRCCQ92733 491 aaPredicted RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 SEPT10Q9P0V9 454 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 SERGEFQ9UGK8 458 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 R3HDM2Q9Y2K5 976 aaKnown RBP18.62■□□□□ 0.57
SDF4-201ENST00000263741 JRKLQ9Y4A0 524 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 GON4LQ3T8J9 2241 aa18.62■□□□□ 0.57
SDF4-201ENST00000263741 APOC4-APOC2K7ER74 178 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 KRIT1O00522 736 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 FANCGO15287 622 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms