RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 RFWD3Q6PCD5 774 aa16.03■□□□□ 0.16
SHANK3-201ENST00000262795 MICU2Q8IYU8 434 aa16.03■□□□□ 0.16
SHANK3-201ENST00000262795 NDNQ99608 321 aa16.03■□□□□ 0.16
SHANK3-201ENST00000262795 C11orf84Q9BUA3 381 aaPredicted RBP16.03■□□□□ 0.16
SHANK3-201ENST00000262795 RBM12Q9NTZ6 932 aaKnown RBP16.03■□□□□ 0.16
SHANK3-201ENST00000262795 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
SHANK3-201ENST00000262795 A0A1B0GW55 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L2P0CJ85 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L3P0CJ86 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L4P0CJ87 422 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L5P0CJ88 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L6P0CJ89 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4L7P0CJ90 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 SUZ12Q15022 739 aaKnown RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 RAB30Q15771 203 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 ARL14EPQ8N8R7 260 aaPredicted RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 KCT2Q8NC54 265 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 OLFM1Q99784 485 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 AVENQ9NQS1 362 aaPredicted RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 DUX4Q9UBX2 424 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 LRRC72A6NJI9 287 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 GJA1P17302 382 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 IRAK1P51617 712 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 COL9A2Q14055 689 aaPredicted RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 NCF4Q15080 339 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 FAM126AQ9BYI3 521 aaPredicted RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 TSPAN8P19075 237 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 PAICSP22234 425 aaKnown RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 C4orf22Q6V702 233 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 CHST15Q7LFX5 561 aaPredicted RBP16.02■□□□□ 0.16
SHANK3-201ENST00000262795 GALNT13Q8IUC8 556 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 ZYG11BQ9C0D3 744 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 POMKQ9H5K3 350 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.16
SHANK3-201ENST00000262795 ISLR2Q6UXK2 745 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 CIR1Q86X95 450 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 ZNF557Q8N988 423 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 A0A1W2PQC6 194 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 TP73O15350 636 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 FGF19O95750 216 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 RARRES1P49788 294 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 ARID3BQ8IVW6 561 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 NMD3Q96D46 503 aaKnown RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 SHDQ96IW2 340 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 FBXO6Q9NRD1 293 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 ARL2BPQ9Y2Y0 163 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 IQCF5A8MTL0 148 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 TIMM44O43615 452 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 UGT2B4P06133 528 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 SLC6A3Q01959 620 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 CYLC2Q14093 348 aaPredicted RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 ESRP1Q6NXG1 681 aaKnown RBP16.02■□□□□ 0.15
SHANK3-201ENST00000262795 ZNF248Q8NDW4 579 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 C5orf34Q96MH7 638 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.15
SHANK3-201ENST00000262795 CARNS1A5YM72 827 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 PSMA4P25789 261 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 TLE2Q04725 743 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 CNGA2Q16280 664 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 RIPOR1Q6ZS17 1223 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 CDH24Q86UP0 819 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 LRRN4CLQ8ND94 238 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 MPP4Q96JB8 637 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 SNTNA6NMZ2 147 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 LRATO95237 230 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 ADGRG6Q86SQ4 1221 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 PROX1Q92786 737 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 CMTM5Q96DZ9 223 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 HCN3Q9P1Z3 774 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 PSME2Q9UL46 239 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 USP15Q9Y4E8 981 aaPredicted RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 GUCY1B2O75343 617 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 SLITRK3O94933 977 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 TAF10Q12962 218 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 IFNL1Q8IU54 200 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 RPL10LQ96L21 214 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 FRMD6Q96NE9 622 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 PTPN18Q99952 460 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 DPYSL5Q9BPU6 564 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 NEK6Q9HC98 313 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 DUSP12Q9UNI6 340 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 HCN4Q9Y3Q4 1203 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 DCLK1O15075 740 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 CD3EAPO15446 510 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 HNRNPRO43390 633 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 CATP04040 527 aaKnown RBP16.01■□□□□ 0.15
SHANK3-201ENST00000262795 NT5EP21589 574 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 SGCBQ16585 318 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 AGKQ53H12 422 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 FAM183BPQ6ZVS7 135 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 DTNBP1Q96EV8 351 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
SHANK3-201ENST00000262795 INTS7Q9NVH2 962 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms