RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TRAFD1O14545 582 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CHUKO15111 745 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PEX11BO96011 259 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 KITP10721 976 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CPA3P15088 417 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC1A6P48664 564 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 WNT3AP56704 352 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ITKQ08881 620 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PCSK7Q16549 785 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CLEC14AQ86T13 490 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ZC3HC1Q86WB0 502 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 C10orf107Q8IVU9 208 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SREK1Q8WXA9 508 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC7A6OSQ96CW6 309 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 GPR22Q99680 433 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 UBE2OQ9C0C9 1292 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 C20orf27Q9GZN8 174 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CAB39LQ9H9S4 337 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 FBXO6Q9NRD1 293 aaPredicted RBP13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 ANKRD6Q9Y2G4 727 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 NUMBLQ9Y6R0 609 aa13.12□□□□□ -0.31
SPTLC1-201ENST00000262554 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 C2orf71A6NGG8 1288 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 J3KR12 359 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TLR5O60602 858 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 VAPBO95292 243 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 PRKCGP05129 697 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 C2P06681 752 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 ZDHHC11BP0C7U3 371 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 PTPN4P29074 926 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 ABCG1P45844 678 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 APLP1P51693 650 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 AQP5P55064 265 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 SEPT6Q14141 434 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 KRT72Q14CN4 511 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 PARP15Q460N3 678 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 KDELC1Q6UW63 502 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TAS1R1Q7RTX1 841 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 CNTN4Q8IWV2 1026 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 SCLYQ96I15 445 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 VPS45Q9NRW7 570 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 MARCOQ9UEW3 520 aaPredicted RBP13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TLK1Q9UKI8 766 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 CEP350Q5VT06 3117 aa13.11□□□□□ -0.31
SPTLC1-201ENST00000262554 FCHO1O14526 889 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 CCDC22O60826 627 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 RAMP2O60895 175 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 PARNO95453 639 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 APOA4P06727 396 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 RALBP11234 206 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC8A1P32418 973 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 POLD2P49005 469 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 MAPKAPK2P49137 400 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 ALDH7A1P49419 539 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 SLC10A7Q0GE19 358 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 GRM3Q14832 879 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 ESRP1Q6NXG1 681 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 RAPH1Q70E73 1250 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 KDELC2Q7Z4H8 507 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 PLD6Q8N2A8 252 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 PIWIL2Q8TC59 973 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 PSMG2Q969U7 264 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 FAM167BQ9BTA0 163 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 TTLL2Q9BWV7 592 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 ARNT2Q9HBZ2 717 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 MID2Q9UJV3 735 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
SPTLC1-201ENST00000262554 HEATR9A2RTY3 570 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms