RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 HEPHQ9BQS7 1158 aa19.07■□□□□ 0.64
CYSTM1-201ENST00000261811 CINPQ9BW66 212 aaPredicted RBP19.07■□□□□ 0.64
CYSTM1-201ENST00000261811 PABPC3Q9H361 631 aaKnown RBP19.07■□□□□ 0.64
CYSTM1-201ENST00000261811 INVSQ9Y283 1065 aa19.07■□□□□ 0.64
CYSTM1-201ENST00000261811 C3orf70A6NLC5 250 aaPredicted RBP19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 J3KR12 359 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 POP4O95707 220 aaKnown RBP19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 CD6P30203 668 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 CDKN2BP42772 138 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 NR2C2P49116 596 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 SLC9A4Q6AI14 798 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 MFSD7Q6UXD7 560 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 PIP4K2CQ8TBX8 421 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 ZC3H10Q96K80 434 aaKnown RBP19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 TM6SF2Q9BZW4 377 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 PDFQ9HBH1 243 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 FBXL12Q9NXK8 326 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 SEPT3Q9UH03 358 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 FZD4Q9ULV1 537 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 MFHAS1Q9Y4C4 1052 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 HEY1Q9Y5J3 304 aa19.06■□□□□ 0.64
CYSTM1-201ENST00000261811 IGHV1OR15-9A0A0B4J2B8 117 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 PPP1R12AO14974 1030 aaPredicted RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 MID1O15344 667 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 MFSD11O43934 449 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 CD160O95971 181 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 IGLV3-19P01714 112 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 CCNCP24863 283 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 HSPA9P38646 679 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 GARSP41250 739 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 CCNHP51946 323 aaPredicted RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 RPL6Q02878 288 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 GALNT2Q10471 571 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 SRSF5Q13243 272 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 ZNF235Q14590 738 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 LBRQ14739 615 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 PPP2R5EQ16537 467 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 CCDC181Q5TID7 509 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 LAIR1Q6GTX8 287 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 DPY19L3Q6ZPD9 716 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 PQLC3Q8N755 202 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 CCNYQ8ND76 341 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 TRIM58Q8NG06 486 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 FAM122AQ96E09 287 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 LOXL4Q96JB6 756 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 OSBPL1AQ9BXW6 950 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 BTBD1Q9H0C5 482 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 BRD8Q9H0E9 1235 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 ZDHHC6Q9H6R6 413 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 SGK2Q9HBY8 427 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 GMEB2Q9UKD1 530 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 PPM1HQ9ULR3 514 aa19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 SMG5Q9UPR3 1016 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 TNRC6BQ9UPQ9 1833 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-201ENST00000261811 A0A0U1RQJ8 604 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 KPNA3O00505 521 aaPredicted RBP19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 KRIT1O00522 736 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 MAFKO60675 156 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 RNASEH2AO75792 299 aaKnown RBP19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 TGM2P21980 687 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 DPP6P42658 865 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 MAPK8P45983 427 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 PDK1Q15118 436 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 MYLK3Q32MK0 819 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 MARC1Q5VT66 337 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 KAZNQ674X7 775 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 HDDC3Q8N4P3 179 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 KRT35Q92764 455 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 P3H4Q92791 437 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 FOXJ1Q92949 421 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 TOE1Q96GM8 510 aaKnown RBP19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 EFR3BQ9Y2G0 817 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 ACTL7AQ9Y615 435 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 CAPN6Q9Y6Q1 641 aa19.04■□□□□ 0.64
CYSTM1-201ENST00000261811 SLC7A4O43246 635 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 CST8O60676 142 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 ZNF821O75541 412 aaPredicted RBP19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 FTCDO95954 541 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 MSNP26038 577 aaKnown RBP19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 DYNLT1P63172 113 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 ZNF33AQ06730 810 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 NSUN2Q08J23 767 aaKnown RBP eCLIP19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 CYTH1Q15438 398 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 TAZQ16635 292 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 PLK5Q496M5 336 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 ARSIQ5FYB1 569 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 SYCP2LQ5T4T6 812 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 ARHGAP36Q6ZRI8 547 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 FAM124AQ86V42 546 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 PLD5Q8N7P1 536 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 NETO2Q8NC67 525 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 GRIN3AQ8TCU5 1115 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 FATE1Q969F0 183 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 HDAC11Q96DB2 347 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 TSGA13Q96PP4 275 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 FERMT1Q9BQL6 677 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 PCED1AQ9H1Q7 454 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 WSB2Q9NYS7 404 aaPredicted RBP19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 DTLQ9NZJ0 730 aa19.03■□□□□ 0.64
CYSTM1-201ENST00000261811 NCDNQ9UBB6 729 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms