RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TRPV3Q8NET8 790 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 IKZF3Q9UKT9 509 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 GTPBP1O00178 669 aaKnown RBP14.45□□□□□ -0.1
CUX2-201ENST00000261726 KPNA6O60684 536 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 PIGNO95427 931 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 PTENP60484 403 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 TRIM28Q13263 835 aaKnown RBP14.45□□□□□ -0.1
CUX2-201ENST00000261726 ZFP1Q6P2D0 407 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 ZNF75CPQ92670 426 aaPredicted RBP14.45□□□□□ -0.1
CUX2-201ENST00000261726 ZFP14Q9HCL3 533 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 SLC12A4Q9UP95 1085 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 TNFSF13BQ9Y275 285 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 SLIT1O75093 1534 aa14.45□□□□□ -0.1
CUX2-201ENST00000261726 NTSR2O95665 410 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 SERPINA4P29622 427 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 MFSD10Q14728 455 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 RAET1GQ6H3X3 334 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 QRFPRQ96P65 431 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 CAB39LQ9H9S4 337 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 UXTQ9UBK9 157 aaPredicted RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 FAM92AA1XBS5 289 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 FARP2O94887 1054 aaPredicted RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 KCNT2Q6UVM3 1135 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 GCNT7Q6ZNI0 430 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 PPP1R16AQ96I34 528 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 DNPEPQ9ULA0 475 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 TKTP29401 623 aaKnown RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 CRADDP78560 199 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 IRF8Q02556 426 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 ADGRG2Q8IZP9 1017 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 PNMA5Q96PV4 448 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 TNKS2Q9H2K2 1166 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 DMGDHQ9UI17 866 aaKnown RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 FAM86B1E9PN63 330 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 TRIM3O75382 744 aaPredicted RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 DBTP11182 482 aaKnown RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 PIK3CGP48736 1102 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 TXNRD3Q86VQ6 643 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 CXorf40BQ96DE9 158 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 SLC25A23Q9BV35 468 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 POLR1EQ9GZS1 481 aaKnown RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 ABCB10Q9NRK6 738 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 ATP5BP06576 529 aaKnown RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 RAB27AP51159 221 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 IFI35P80217 286 aaPredicted RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 VPS72Q15906 364 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 METTL7BQ6UX53 244 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 CLEC17AQ6ZS10 378 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 DAW1Q8N136 415 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 PEX11AO75192 247 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 CSF1RP07333 972 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 CD86P42081 329 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 ULK3Q6PHR2 472 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 FBXO6Q9NRD1 293 aaPredicted RBP14.44□□□□□ -0.1
CUX2-201ENST00000261726 TMEM216Q9P0N5 145 aa14.44□□□□□ -0.1
CUX2-201ENST00000261726 MCIDASD6RGH6 385 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PRODHO43272 600 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 SNUPNO95149 360 aaKnown RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 NR2F1P10589 423 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 EPHX2P34913 555 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 CDK16Q00536 496 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ACAP1Q15027 740 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PMM1Q92871 262 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ING3Q9NXR8 418 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 ZSCAN5CA6NGD5 496 aaPredicted RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 SGTAO43765 313 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ZMPSTE24O75844 475 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 GRIA3P42263 894 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PAPD7Q5XG87 772 aaKnown RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 NEK6Q9HC98 313 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 CDH9Q9ULB4 789 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 GMPPBQ9Y5P6 360 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 SCN2BO60939 215 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 TSPAN8P19075 237 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 RBL1P28749 1068 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 RNASE12Q5GAN4 147 aaKnown RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 C9orf131Q5VYM1 1079 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 TTI2Q6NXR4 508 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 LLGL2Q6P1M3 1020 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ATG14Q6ZNE5 492 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PIGKQ92643 395 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 MYLPFQ96A32 169 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 RERGQ96A58 199 aaPredicted RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 RAD51AP1Q96B01 352 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 SLC38A2Q96QD8 506 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 C1orf50Q9BV19 199 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ARHGAP20Q9P2F6 1191 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PSME2Q9UL46 239 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 A0A087WXM4 84 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PDHXO00330 501 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PLOD3O60568 738 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 S100GP29377 79 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 CDC25CP30307 473 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 ABL2P42684 1182 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 RPL14P50914 215 aaKnown RBP14.43□□□□□ -0.1
CUX2-201ENST00000261726 PGM5Q15124 567 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 TIMM50Q3ZCQ8 353 aa14.43□□□□□ -0.1
CUX2-201ENST00000261726 PERM1Q5SV97 790 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms