RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 CDH6P55285 790 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 GEMIN4P57678 1058 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 SFSWAPQ12872 951 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DPYSQ14117 519 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 KRT81Q14533 505 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 SF3A2Q15428 464 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 SPA17Q15506 151 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DCAF12L1Q5VU92 463 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 RAD9BQ6WBX8 426 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DPY19L3Q6ZPD9 716 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PRR23CQ6ZRP0 262 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DSG4Q86SJ6 1040 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 ARHGAP12Q8IWW6 846 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 TP53INP2Q8IXH6 220 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 RGL4Q8IZJ4 473 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PCDH20Q8N6Y1 951 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 NPWQ8N729 165 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 KCTD6Q8NC69 237 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CHST14Q8NCH0 376 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PIP4K2CQ8TBX8 421 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 FAM71BQ8TC56 605 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 RFFLQ8WZ73 363 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CCDC114Q96M63 670 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 HSPA12BQ96MM6 686 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CSPG4P5Q96PW8 444 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 BAG1Q99933 345 aaPredicted RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 C6orf106Q9H6K1 298 aaPredicted RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 SGK2Q9HBY8 427 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 ETNK2Q9NVF9 386 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DONSONQ9NYP3 566 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 IL36AQ9UHA7 158 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PILRBQ9UKJ0 227 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 MFHAS1Q9Y4C4 1052 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 ATXN2Q99700 1313 aaKnown RBP8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CACNA1HO95180 2353 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 ZNF292O60281 2723 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ZSCAN5CA6NGD5 496 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 FAM47DPA6NHR8 397 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ARHGAP42A6NI28 874 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 DFFAO00273 331 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 GPR37O15354 613 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 GDF9O60383 454 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 PLXNA2O75051 1894 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 LEFTY1O75610 366 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 SEMA4FO95754 770 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 GKP32189 559 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 MAN1A1P33908 653 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 RECQLP46063 649 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 NOP2P46087 812 aaKnown RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ARSEP51690 589 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 CCNHP51946 323 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 HADHBP55084 474 aaKnown RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 DPYSL3Q14195 570 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 CYTH1Q15438 398 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 POM121L1PQ3SYA9 428 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 INO80DQ53TQ3 878 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 SYCP2LQ5T4T6 812 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 FAM46CQ5VWP2 391 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 AFMIDQ63HM1 303 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TCEAL6Q6IPX3 200 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 SPAG17Q6Q759 2223 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TMCO3Q6UWJ1 677 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ARHGAP36Q6ZRI8 547 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 SYT12Q8IV01 421 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TMEM139Q8IV31 216 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 RYBPQ8N488 228 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 LZTR1Q8N653 840 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TMIEQ8NEW7 156 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 OR2AP1Q8NGE2 309 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 OR14C36Q8NHC7 312 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TSC1Q92574 1164 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TCEAL3Q969E4 200 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ISG20Q96AZ6 181 aaKnown RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ARRDC3Q96B67 414 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 BIRC7Q96CA5 298 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 HEPHQ9BQS7 1158 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TM6SF2Q9BZW4 377 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 PDFQ9HBH1 243 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 RXFP3Q9NSD7 469 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 KLHL11Q9NVR0 708 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 ADAMTS9Q9P2N4 1935 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 HECAQ9UBI9 543 aaPredicted RBP8.67□□□□□ -1.02
TMEM258-201ENST00000257262 FZD4Q9ULV1 537 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 HYOU1Q9Y4L1 999 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 WASF2Q9Y6W5 498 aa8.67□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3DA0A087WVF3 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3IA0A087WXS9 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3EA0A087X179 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3KA0A087X1G2 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3FA6NER0 549 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 MEI4A8MW99 385 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 TBC1D3LB9A6J9 549 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 KPNA3O00505 521 aaPredicted RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 KRIT1O00522 736 aa8.66□□□□□ -1.02
TMEM258-201ENST00000257262 KHNYNO15037 678 aaKnown RBP8.66□□□□□ -1.02
TMEM258-201ENST00000257262 PRAMEF11O60813 436 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms