RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 HOXD9P28356 352 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 PBX2P40425 430 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 MAGEA10P43363 369 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 NIPAL4Q0D2K0 466 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 IHHQ14623 411 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 LBRQ14739 615 aaKnown RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 STEAP4Q687X5 459 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 NAPEPLDQ6IQ20 393 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 Q6ZNB5 142 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 TEX26Q8N6G2 289 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 FCRL3Q96P31 734 aaPredicted RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 MAGEH1Q9H213 219 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 PPCSQ9HAB8 311 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 SAMD15Q9P1V8 674 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 YBX2Q9Y2T7 364 aaKnown RBP19.2■□□□□ 0.66
TRIM47-201ENST00000254816 MYOFQ9NZM1 2061 aa19.2■□□□□ 0.66
TRIM47-201ENST00000254816 TRAV19A0A0A6YYK7 116 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 TCP11X1B4DZS4 312 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 SPAG7O75391 227 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 GSTA2P09210 222 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 CD86P42081 329 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 GEMP55040 296 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 CDH17Q12864 832 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 CRYMQ14894 314 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 PIGWQ7Z7B1 504 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 C4orf33Q8N1A6 199 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 CARNMT1Q8N4J0 409 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 SHKBP1Q8TBC3 707 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 FATE1Q969F0 183 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 MRGPRX2Q96LB1 330 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 DDX50Q9BQ39 737 aaKnown RBP19.19■□□□□ 0.66
TRIM47-201ENST00000254816 PDFQ9HBH1 243 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 IKBKGQ9Y6K9 419 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 RPS6KL1Q9Y6S9 549 aa19.19■□□□□ 0.66
TRIM47-201ENST00000254816 CCDC78A2IDD5 438 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 MUSKO15146 869 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 PSMD3O43242 534 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 INHBAP08476 426 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 NTHL1P78549 312 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 FSCBQ5H9T9 825 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 CHST9Q7L1S5 443 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 SLC25A51Q9H1U9 297 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 TRABDQ9H4I3 376 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 FGFR1OP2Q9NVK5 253 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 MOCS1Q9NZB8 636 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 SH3BP1Q9Y3L3 701 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 RB1P06400 928 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 SLC7A9P82251 487 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 GPM6BQ13491 265 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 RASA2Q15283 850 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 TEAD2Q15562 447 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 GPR158Q5T848 1215 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 RNF219Q5W0B1 726 aaPredicted RBP19.18■□□□□ 0.66
TRIM47-201ENST00000254816 CXorf57Q6NSI4 855 aaKnown RBP19.18■□□□□ 0.66
TRIM47-201ENST00000254816 LINC00523Q86TU6 105 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 LRRC6Q86X45 466 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 BBS7Q8IWZ6 715 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 MZB1Q8WU39 189 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 CCT6BQ92526 530 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 IMP4Q96G21 291 aaKnown RBP19.18■□□□□ 0.66
TRIM47-201ENST00000254816 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
TRIM47-201ENST00000254816 FSD1LQ9BXM9 530 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 CHRAC1Q9NRG0 131 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 CCL26Q9Y258 94 aa19.18■□□□□ 0.66
TRIM47-201ENST00000254816 FAM159BA6NKW6 160 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 H0Y626 953 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 MMP2P08253 660 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ADRA1AP35348 466 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 CHRNA4P43681 627 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 SLC5A9Q2M3M2 681 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 DENND5AQ6IQ26 1287 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ADGRD2Q7Z7M1 963 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 CNPY4Q8N129 248 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ZNF669Q96BR6 464 aaPredicted RBP19.17■□□□□ 0.66
TRIM47-201ENST00000254816 TMA16Q96EY4 203 aaKnown RBP19.17■□□□□ 0.66
TRIM47-201ENST00000254816 KLF6Q99612 283 aaPredicted RBP19.17■□□□□ 0.66
TRIM47-201ENST00000254816 MUC3BQ9H195 1237 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ATP13A1Q9HD20 1204 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 LSM7Q9UK45 103 aaKnown RBP19.17■□□□□ 0.66
TRIM47-201ENST00000254816 BPTFQ12830 3046 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ANKRD36A6QL64 1941 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 CEP290O15078 2479 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 LEFTY2O00292 366 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 MOSPD3O75425 235 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 LATS1O95835 1130 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 C1RP00736 705 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 POLBP06746 335 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 RHOP08100 348 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 PTPN2P17706 415 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 NPY2RP49146 381 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 OXCT1P55809 520 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ZKSCAN8Q15776 578 aaPredicted RBP19.17■□□□□ 0.66
TRIM47-201ENST00000254816 TMCO4Q5TGY1 634 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 KDELC1Q6UW63 502 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 SLC26A11Q86WA9 606 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 SLC25A41Q8N5S1 370 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ANKS4BQ8N8V4 417 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 WFDC5Q8TCV5 224 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 MFSD3Q96ES6 412 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms