RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PLOD2O00469 737 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 VTNP04004 478 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 DPEP1P16444 411 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 KRT80Q6KB66 452 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 HMGCLL1Q8TB92 370 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 FNDC8Q8TC99 324 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 LPGAT1Q92604 370 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 ZMAT2Q96NC0 199 aaKnown RBP15.72■□□□□ 0.11
DDX55-201ENST00000238146 PLEKHG4BQ96PX9 1271 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 CIB1Q99828 191 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 UNC93B1Q9H1C4 597 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 RHOJQ9H4E5 214 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 PNPLA3Q9NST1 481 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 CCDC78A2IDD5 438 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 EEF2KO00418 725 aaKnown RBP15.72■□□□□ 0.11
DDX55-201ENST00000238146 INSRRP14616 1297 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 GABRB3P28472 473 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 PDAP1Q13442 181 aaKnown RBP15.72■□□□□ 0.11
DDX55-201ENST00000238146 DGKDQ16760 1214 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 SH3D19Q5HYK7 790 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 TSTD2Q5T7W7 516 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 ACBD5Q5T8D3 534 aaPredicted RBP15.72■□□□□ 0.11
DDX55-201ENST00000238146 LRRC8EQ6NSJ5 796 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 MICALL2Q8IY33 904 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 PELI3Q8N2H9 469 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 RMND5BQ96G75 393 aaPredicted RBP15.72■□□□□ 0.11
DDX55-201ENST00000238146 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 OMDQ99983 421 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 AKT3Q9Y243 479 aa15.72■□□□□ 0.11
DDX55-201ENST00000238146 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 FAM72CH0Y354 149 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 TRIM24O15164 1050 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 LMO2P25791 158 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 ACADSBP45954 432 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 STT3AP46977 705 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 NPY2RP49146 381 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 TUBA4AP68366 448 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 RALGDSQ12967 914 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 SLC12A1Q13621 1099 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 LRP8Q14114 963 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 ZNF460Q14592 562 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 FAM72AQ5TYM5 149 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 FAM72DQ6L9T8 149 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 HMBOX1Q6NT76 420 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 FAM72BQ86X60 149 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 TOP1MTQ969P6 601 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 HSFY1Q96LI6 401 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 RANBP9Q96S59 729 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 CACNA2D2Q9NY47 1150 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 IPO11Q9UI26 975 aaKnown RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 CITO14578 2027 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 HTRA2O43464 458 aaPredicted RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 TSPAN1O60635 241 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 PGK2P07205 417 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 CDH15P55291 814 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 DHRS4L2Q6PKH6 230 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 SLC41A1Q8IVJ1 513 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 BBS5Q8N3I7 341 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 SPATA6LQ8N4H0 392 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 SNRNP27Q8WVK2 155 aaKnown RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 PPP1R14BQ96C90 147 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 GPR78Q96P69 363 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 UHRF1Q96T88 793 aaPredicted RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 UNKQ9C0B0 810 aaKnown RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 NOL11Q9H8H0 719 aaKnown RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 MRPL40Q9NQ50 206 aaKnown RBP15.71■□□□□ 0.11
DDX55-201ENST00000238146 RRN3Q9NYV6 651 aa15.71■□□□□ 0.11
DDX55-201ENST00000238146 TCRBV3S1A0A5B6 114 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 TRPC5OSA6NMA1 111 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 ERI2A8K979 691 aaKnown RBP15.71■□□□□ 0.1
DDX55-201ENST00000238146 FBP2O00757 339 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 AHSGP02765 367 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 HNRNPCP07910 306 aaKnown RBP eCLIP15.71■□□□□ 0.1
DDX55-201ENST00000238146 ARSAP15289 507 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 ERCC2P18074 760 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 HDCP19113 662 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 SLC7A1P30825 629 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 CYP2R1Q6VVX0 501 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 FIBCD1Q8N539 461 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 SLC2A14Q8TDB8 520 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 NT5C3BQ969T7 300 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 NXNL1Q96CM4 212 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 ANKRD60Q9BZ19 345 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 SPATC1LQ9H0A9 340 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 GBA3Q9H227 469 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 TRPC7Q9HCX4 862 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 DUS2Q9NX74 493 aaKnown RBP15.71■□□□□ 0.1
DDX55-201ENST00000238146 SARDHQ9UL12 918 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 ACOT9Q9Y305 439 aa15.71■□□□□ 0.1
DDX55-201ENST00000238146 HEATR9A2RTY3 570 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 M0QYT0 321 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 PGK1P00558 417 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CKMT2P17540 419 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 EPHX2P34913 555 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 TRAP1Q12931 704 aaKnown RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 STX5Q13190 355 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms