RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CCDC195A0A1B0GUA6 201 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 FCHO1O14526 889 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 SIN3BO75182 1162 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
GAPDH-201ENST00000229239 NMBRP28336 390 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 GPR17Q13304 367 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 C14orf80Q86SX3 495 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 ARHGAP24Q8N264 748 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 SEPT8Q92599 483 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 UTP4Q969X6 686 aaKnown RBP17.1■□□□□ 0.33
GAPDH-201ENST00000229239 TSNARE1Q96NA8 513 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 AGAP2Q99490 1192 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 GPR22Q99680 433 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 SLC25A51Q9H1U9 297 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 MMADHCQ9H3L0 296 aaPredicted RBP17.1■□□□□ 0.33
GAPDH-201ENST00000229239 ARNT2Q9HBZ2 717 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 IARS2Q9NSE4 1012 aaKnown RBP17.1■□□□□ 0.33
GAPDH-201ENST00000229239 UBP1Q9NZI7 540 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 TMEM216Q9P0N5 145 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 A0A096LPK6 155 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 FGBP02675 491 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 PRKCGP05129 697 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 HLA-DQB2P05538 268 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 CPA3P15088 417 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 TPH1P17752 444 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 SLC1A6P48664 564 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 CSRP3P50461 194 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 RING1Q06587 406 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 MS4A13Q5J8X5 152 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 WLSQ5T9L3 541 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 C16orf46Q6P387 395 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 IPMKQ8NFU5 416 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 OR6Y1Q8NGX8 325 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 SPATA22Q8NHS9 363 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 VPS39Q96JC1 886 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 FICDQ9BVA6 458 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 FSD1LQ9BXM9 530 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
GAPDH-201ENST00000229239 TCAF1Q9Y4C2 921 aa17.1■□□□□ 0.33
GAPDH-201ENST00000229239 NUP205Q92621 2012 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 FNDC1Q4ZHG4 1894 aaPredicted RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 IGLV3-27P01718 113 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 LMNAP02545 664 aaKnown RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 SERPINA6P08185 405 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 GPR15P49685 360 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 HK2P52789 917 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 RANBP10Q6VN20 620 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 NSMCE1Q8WV22 266 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 CDK5RAP1Q96SZ6 601 aaKnown RBP17.09■□□□□ 0.33
GAPDH-201ENST00000229239 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■□□□□ 11.3
GAPDH-201ENST00000229239 IL1RAPL1Q9NZN1 696 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 NUDT5Q9UKK9 219 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 NUMBLQ9Y6R0 609 aa17.09■□□□□ 0.33
GAPDH-201ENST00000229239 DRGXA6NNA5 263 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 TBC1D4O60343 1298 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 RALBP11234 206 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 HARS2P49590 506 aaKnown RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 AQP5P55064 265 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 USP46P62068 366 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 ANKS3Q6ZW76 656 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 ZC3HC1Q86WB0 502 aaKnown RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 CEP57Q86XR8 500 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 ANKRD27Q96NW4 1050 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 RANBP9Q96S59 729 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 FAM167BQ9BTA0 163 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 NOL6Q9H6R4 1146 aaKnown RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 FBXO6Q9NRD1 293 aaPredicted RBP17.08■□□□□ 0.33
GAPDH-201ENST00000229239 NDFIP2Q9NV92 336 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 MARCH5Q9NX47 278 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 MPP6Q9NZW5 540 aa17.08■□□□□ 0.33
GAPDH-201ENST00000229239 COL6A3P12111 3177 aa17.08■□□□□ 0.32
GAPDH-201ENST00000229239 MTMR11A4FU01 709 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 NBNO60934 754 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 SNUPNO95149 360 aaKnown RBP17.07■□□□□ 0.32
GAPDH-201ENST00000229239 KLHL2O95198 593 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 PEX11BO96011 259 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 C2P06681 752 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 HAPLN1P10915 354 aaPredicted RBP17.07■□□□□ 0.32
GAPDH-201ENST00000229239 CPB1P15086 417 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 ALOX15P16050 662 aaPredicted RBP17.07■□□□□ 0.32
GAPDH-201ENST00000229239 RFC2P35250 354 aa17.07■□□□□ 0.32
GAPDH-201ENST00000229239 IRX4P78413 519 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms