RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PDGFRAP16234 1089 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 ANKRD26P1Q6NSI1 321 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 FAM183BPQ6ZVS7 135 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 CHSY3Q70JA7 882 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 CCDC80Q76M96 950 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 GABPB2Q8TAK5 448 aaPredicted RBP14.3□□□□□ -0.12
SF1-201ENST00000227503 LPGAT1Q92604 370 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 RPL10LQ96L21 214 aaKnown RBP14.3□□□□□ -0.12
SF1-201ENST00000227503 SNX15Q9NRS6 342 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 MTMR10Q9NXD2 777 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 MOCS1Q9NZB8 636 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 B4GAT1O43505 415 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 AKAP10O43572 662 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 CARTPTQ16568 116 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 PCDH19Q8TAB3 1148 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 SIAEQ9HAT2 523 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
SF1-201ENST00000227503 PCDH12Q9NPG4 1184 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 NCKIPSDQ9NZQ3 722 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 RGS17Q9UGC6 210 aaPredicted RBP14.3□□□□□ -0.12
SF1-201ENST00000227503 DCDC2Q9UHG0 476 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 ZDHHC2Q9UIJ5 367 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 CNOT6Q9ULM6 557 aaKnown RBP14.3□□□□□ -0.12
SF1-201ENST00000227503 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 G3V2L1 256 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 PRPSAP2O60256 369 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 PIGNO95427 931 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 PFKMP08237 780 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 INHBBP09529 407 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 PAX3P23760 479 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 ATICP31939 592 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 CCDC14Q49A88 953 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 ILDR2Q71H61 639 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 ARMCX6Q7L4S7 300 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 CYGBQ8WWM9 190 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 TAMM41Q96BW9 452 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 AGAP2Q99490 1192 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 SLC8A2Q9UPR5 921 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 TMED5Q9Y3A6 229 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 GPC6Q9Y625 555 aaPredicted RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 KRBA1A5PL33 1030 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 BMP10O95393 424 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 MT-CO1P00395 513 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 MAGEA6P43360 314 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 NHSL2Q5HYW2 709 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 OR6B2Q6IFH4 312 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 TIFABQ6ZNK6 161 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 SPATA6LQ8N4H0 392 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 CBR4Q8N4T8 237 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 Q8N9G6 341 aaPredicted RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 RP9Q8TA86 221 aaKnown RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 HERC2P3Q9BVR0 1158 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
SF1-201ENST00000227503 COPG1Q9Y678 874 aaKnown RBP14.29□□□□□ -0.12
SF1-201ENST00000227503 PRORSD1PA6NEY8 169 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 NCAM1P13591 858 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 MX2P20592 715 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 NDST1P52848 882 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 TNK2Q07912 1038 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 INCA1Q0VD86 236 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 AMHR2Q16671 573 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 IL31Q6EBC2 164 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 LCLAT1Q6UWP7 414 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 HPS1Q92902 700 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SPATA33Q96N06 139 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 FRMD8Q9BZ67 464 aaPredicted RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 GBA2Q9HCG7 927 aaPredicted RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 GPRC5DQ9NZD1 345 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 TXNDC16Q9P2K2 825 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 AURKCQ9UQB9 309 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 DGKBQ9Y6T7 804 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 USP12O75317 370 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 ATXN1P54253 815 aaKnown RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 PSME3P61289 254 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 PRKCQQ04759 706 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 PLCL1Q15111 1095 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 PDK2Q15119 407 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SLC10A6Q3KNW5 377 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 ARL13AQ5H913 290 aaPredicted RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 NFKBIZQ9BYH8 718 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 TRIM8Q9BZR9 551 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 VPS45Q9NRW7 570 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 PRMT7Q9NVM4 692 aaPredicted RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 TSPAN16Q9UKR8 245 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 A0A087WXM4 84 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 BCLAF3A2AJT9 711 aaKnown RBP14.28□□□□□ -0.12
SF1-201ENST00000227503 CFAP99D6REC4 459 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 APOL1O14791 398 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 GRID2O43424 1007 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SULT1C4O75897 302 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 PGK2P07205 417 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms