RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CXCL8P10145 99 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 COL6A2P12110 1019 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 NAT1P18440 290 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CYP3A5P20815 502 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 SERPINB5P36952 375 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 POLD2P49005 469 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CSRP3P50461 194 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 NDST1P52848 882 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 MAPRE2Q15555 327 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 SLC26A9Q7LBE3 791 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 CARM1Q86X55 608 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 BBS5Q8N3I7 341 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 HPDLQ96IR7 371 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 GATA5Q9BWX5 397 aaPredicted RBP16.17■□□□□ 0.18
SF3A2-201ENST00000221494 DNAI2Q9GZS0 605 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 PLGRKTQ9HBL7 147 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 APPL1Q9UKG1 709 aa16.17■□□□□ 0.18
SF3A2-201ENST00000221494 TANC1Q9C0D5 1861 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 A0A096LPK6 155 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 AP3B1O00203 1094 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 DNAJB2P25686 324 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 HOXA11P31270 313 aaPredicted RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 ARL4AP40617 200 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 OSTNP61366 133 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 PDK1Q15118 436 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 LSM12Q3MHD2 195 aaKnown RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 PPM1JQ5JR12 505 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 NAPRTQ6XQN6 538 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 TMEM135Q86UB9 458 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.16■□□□□ 0.188e-7■■■■■ 32.4
SF3A2-201ENST00000221494 RAET1EQ8TD07 263 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 ZNF296Q8WUU4 475 aaPredicted RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 RCN3Q96D15 328 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 PIWIL1Q96J94 861 aaKnown RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 OSMRQ99650 979 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 CCT7Q99832 543 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 DHX35Q9H5Z1 703 aaKnown RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 DDX18Q9NVP1 670 aaKnown RBP16.16■□□□□ 0.18
SF3A2-201ENST00000221494 SYBUQ9NX95 663 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 MYRFQ9Y2G1 1151 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
SF3A2-201ENST00000221494 H3BNH8 94 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 FKTNO75072 461 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 SESN2P58004 480 aaPredicted RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 RBP5P82980 135 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 CDKL1Q00532 357 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 PEX6Q13608 980 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 SPIDRQ14159 915 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 KCNA10Q16322 511 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 MGAT5BQ3V5L5 792 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 KCTD21Q4G0X4 260 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 C6orf52Q5T4I8 152 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 RWDD4Q6NW29 188 aaKnown RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 IYDQ6PHW0 289 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 SLC35F5Q8WV83 523 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 MCMBPQ9BTE3 642 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 EFHD1Q9BUP0 239 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 RALGAPA2Q2PPJ7 1873 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TRPC5OSA6NMA1 111 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 LACTBL1A8MY62 500 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 RNF103O00237 685 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 CLASP2O75122 1294 aaKnown RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 ASGR1P07306 291 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 RPL34P49207 117 aaKnown RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 ORC1Q13415 861 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 PPP2R5DQ14738 602 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 FSTL4Q6MZW2 842 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 PACRGLQ8N7B6 248 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 EFCAB3Q8N7B9 438 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TRIML2Q8N7C3 387 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TERB1Q8NA31 727 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TMEM40Q8WWA1 233 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 KCTD15Q96SI1 283 aaPredicted RBP16.15■□□□□ 0.18
SF3A2-201ENST00000221494 C8orf4Q9NR00 106 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 MAN1C1Q9NR34 630 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 FAIMQ9NVQ4 179 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 SAGE1Q9NXZ1 904 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 SLC8A2Q9UPR5 921 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 TRIP11Q15643 1979 aa16.15■□□□□ 0.18
SF3A2-201ENST00000221494 FNDC1Q4ZHG4 1894 aaPredicted RBP16.14■□□□□ 0.17
SF3A2-201ENST00000221494 ARHGEF37A1IGU5 675 aa16.14■□□□□ 0.17
SF3A2-201ENST00000221494 SH3PXD2BA1X283 911 aa16.14■□□□□ 0.17
SF3A2-201ENST00000221494 GRID2O43424 1007 aa16.14■□□□□ 0.17
SF3A2-201ENST00000221494 MS4A2Q01362 244 aa16.14■□□□□ 0.17
SF3A2-201ENST00000221494 RHDQ02161 417 aa16.14■□□□□ 0.17
SF3A2-201ENST00000221494 PCBP1Q15365 356 aaKnown RBP eCLIP16.14■□□□□ 0.178e-16■■■■■ 30.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms