RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 PABPC5Q96DU9 382 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 RPRD1AQ96P16 312 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 C12orf65Q9H3J6 166 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 SMOC2Q9H3U7 446 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 DCLRE1BQ9H816 532 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 PIDD1Q9HB75 910 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 MRGBPQ9NV56 204 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 COMMD8Q9NX08 183 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 OSER1Q9NX31 292 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 IL1RAPL1Q9NZN1 696 aa9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 ZMYND8Q9ULU4 1186 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-201ENST00000216605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 EIF4E1BA6NMX2 242 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HNRNPCL1O60812 293 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HNRNPCP07910 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PDHA1P08559 390 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC2A3P11169 496 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TARSP26639 723 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HCAR3P49019 387 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PDE1BQ01064 536 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 GPNMBQ14956 572 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PRKD1Q15139 912 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CCDC6Q16204 474 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TCTN1Q2MV58 587 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 AGAP9Q5VTM2 703 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 RAP1GAP2Q684P5 730 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CGB2Q6NT52 195 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TRMT10BQ6PF06 316 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ADGRD1Q6QNK2 874 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TDRPQ86YL5 185 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ATP6V0D2Q8N8Y2 350 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TTC17Q96AE7 1141 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 LRRC39Q96DD0 335 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ATXN7L3BQ96GX2 97 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 C8orf48Q96LL4 319 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PHTF1Q9UMS5 762 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SCML2Q9UQR0 700 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ZBBXA8MT70 800 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CXorf49A8MYA2 514 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 E9PAM4 449 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 COPEO14579 308 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PTDSS1P48651 473 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF135P52742 658 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CDK16Q00536 496 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 DNAJC3Q13217 504 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 USP41Q3LFD5 358 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TEX44Q53QW1 395 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TMEM154Q6P9G4 183 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ARHGAP36Q6ZRI8 547 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CHSY1Q86X52 802 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 FLCNQ8NFG4 579 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 IPMKQ8NFU5 416 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CFAP61Q8NHU2 1237 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 DIS3LQ8TF46 1054 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 NELL1Q92832 810 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF669Q96BR6 464 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 OSBPL2Q9H1P3 480 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CYP4F11Q9HBI6 524 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 MARCH5Q9NX47 278 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SYBUQ9NX95 663 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TIMM22Q9Y584 194 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HTR3EA5X5Y0 456 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 INPPL1O15357 1258 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 UGT1A9O60656 530 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PMPCBO75439 489 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 POLBP06746 335 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SNRPAP09012 282 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 FOXN2P32314 431 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 IRX4P78413 519 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PPIDQ08752 370 aaKnown RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 ZBTB17Q13105 803 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 GPR17Q13304 367 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PCSK7Q16549 785 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC44A4Q53GD3 710 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 OTOP3Q7RTS5 596 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 BNIPLQ7Z465 357 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 RASSF3Q86WH2 238 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 UNC5BQ8IZJ1 945 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 DCAKDQ8WVC6 231 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SIGLEC10Q96LC7 697 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HAPLN3Q96S86 360 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 FSD1LQ9BXM9 530 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 UGT1A7Q9HAW7 530 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 UGT1A10Q9HAW8 530 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 UGT1A8Q9HAW9 530 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 PAK6Q9NQU5 681 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 RBM22Q9NW64 420 aaKnown RBP eCLIP9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 SAGE1Q9NXZ1 904 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 CHKBQ9Y259 395 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 HS3ST4Q9Y661 456 aa9.05□□□□□ -0.96
MTHFD1-201ENST00000216605 TLR5O60602 858 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 TSHRP16473 764 aa9.04□□□□□ -0.96
MTHFD1-201ENST00000216605 MLLT3P42568 568 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms