RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
SNU13-201ENST00000215956 MYO16Q9Y6X6 1858 aa12.5□□□□□ -0.41
SNU13-201ENST00000215956 KCNU1A8MYU2 1149 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TCEA3O75764 348 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 ZDHHC11BP0C7U3 371 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TPSB2P20231 275 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TUBP50607 506 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
SNU13-201ENST00000215956 TPSAB1Q15661 275 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SNX30Q5VWJ9 437 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TCEAL6Q6IPX3 200 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 KLHDC10Q6PID8 442 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
SNU13-201ENST00000215956 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 CCNYQ8ND76 341 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TCEAL3Q969E4 200 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 LRRC39Q96DD0 335 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 PGM2Q96G03 612 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SLC39A13Q96H72 371 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
SNU13-201ENST00000215956 BTN2A3PQ96KV6 586 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 EDEM2Q9BV94 578 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 EIF2B3Q9NR50 452 aaKnown RBP12.49□□□□□ -0.41
SNU13-201ENST00000215956 ETNK2Q9NVF9 386 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 NINJ2Q9NZG7 142 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SFMBT1Q9UHJ3 866 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 NBEAQ8NFP9 2946 aa12.49□□□□□ -0.41
SNU13-201ENST00000215956 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 WASH4PA8MWX3 477 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 E7ESA3 106 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 RGS16O15492 202 aaPredicted RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 PSMD3O43242 534 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PAGE1O75459 146 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PRAMEF12O95522 483 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 AGTP01019 485 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 GSTA2P09210 222 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 LMAN1P49257 510 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 USP46P62068 366 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 GALNT2Q10471 571 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 AP1B1Q10567 949 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 EFEMP1Q12805 493 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 FOXC1Q12948 553 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PDIA2Q13087 525 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 TIGD7Q6NT04 549 aaPredicted RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 RWDD4Q6NW29 188 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 GAREM2Q75VX8 874 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 FCRL2Q96LA5 508 aaPredicted RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 NACA2Q9H009 215 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 EPB41L4BQ9H329 900 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 XAB2Q9HCS7 855 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 TRPM5Q9NZQ8 1165 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PPARGC1AQ9UBK2 798 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 THADAQ6YHU6 1953 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PTPRDP23468 1912 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ASCC3Q8N3C0 2202 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 AP3B1O00203 1094 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 GIPC1O14908 333 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ATG13O75143 517 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ACSL3O95573 720 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 GABRR2P28476 465 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ATP5C1P36542 298 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 NR1H3Q13133 447 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PARP6Q2NL67 630 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ITPRIPL2Q3MIP1 535 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PLK5Q496M5 336 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 ARHGAP15Q53QZ3 475 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 MANEALQ5VSG8 457 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 TAOK1Q7L7X3 1001 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 CCDC13Q8IYE1 715 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 TTC9BQ8N6N2 239 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PYROXD1Q8WU10 500 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 PSMG2Q969U7 264 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 MYRFLQ96LU7 910 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 DDX50Q9BQ39 737 aaKnown RBP12.48□□□□□ -0.41
SNU13-201ENST00000215956 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
SNU13-201ENST00000215956 C10orf88Q9H8K7 445 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms