RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 CAAP1Q9H8G2 361 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 PRKCGP05129 697 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 SERPINB5P36952 375 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 CHN2P52757 468 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 BST1Q10588 318 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 KRT80Q6KB66 452 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 AGMOQ6ZNB7 445 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 CCT7Q99832 543 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 MAPK10P53779 464 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 ULK2Q8IYT8 1036 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 GABPB2Q8TAK5 448 aaPredicted RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 CASP10Q92851 521 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 XAB2Q9HCS7 855 aaKnown RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
PCDHB4-201ENST00000194152 PENKP01210 267 aaPredicted RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 CHRNA1P02708 482 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ITGB6P18564 788 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 CCR1P32246 355 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SLC5A3P53794 718 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 CSHL1Q14406 222 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 FBXO27Q8NI29 283 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 OXNAD1Q96HP4 312 aaPredicted RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 HSFY1Q96LI6 401 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ABCG8Q9H221 673 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 PAGE1O75459 146 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SPAG6O75602 509 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 RAG1P15918 1043 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 FOLH1Q04609 750 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 KIF19Q2TAC6 998 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 NADK2Q4G0N4 442 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 NAT8LQ8N9F0 302 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 LZICQ8WZA0 190 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ARMC7Q9H6L4 198 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 IL1RL2Q9HB29 575 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ATP8B3O60423 1300 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SMIM31A0A1B0GVY4 71 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 SEC24DO94855 1032 aaPredicted RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ALDH2P05091 517 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 PHEXP78562 749 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 PLEKHG4Q58EX7 1191 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 TAS2R42Q7RTR8 314 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 VPS39Q96JC1 886 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 TMEM109Q9BVC6 243 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 MUC3BQ9H195 1237 aa13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
PCDHB4-201ENST00000194152 OR1E1P30953 314 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 SPRP35270 261 aaPredicted RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 C17orf50Q8WW18 174 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 GMIPQ9P107 970 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 THEGQ9P2T0 379 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 MGEA5O60502 916 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 CAPN15O75808 1086 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 RPL5P46777 297 aaKnown RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 PCYT1AP49585 367 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 CDK16Q00536 496 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 RHBDF2Q6PJF5 856 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 CDHR3Q6ZTQ4 885 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 UQCRBP14927 111 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 TREML1Q86YW5 311 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 GTF2IRD1Q9UHL9 959 aa13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
PCDHB4-201ENST00000194152 A0A096LPK6 155 aa13.09□□□□□ -0.31
PCDHB4-201ENST00000194152 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
PCDHB4-201ENST00000194152 HOXD10P28358 340 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms