RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 WASHC2DQ5SRD0 308 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 MARC1Q5VT66 337 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CES4AQ5XG92 561 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 LHX8Q68G74 356 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 KIAA0930Q6ICG6 404 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ANKS3Q6ZW76 656 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CLEC14AQ86T13 490 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 NPAS4Q8IUM7 802 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FAM13CQ8NE31 585 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 RDH11Q8TC12 318 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CALML6Q8TD86 181 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF419Q96HQ0 510 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 RPRD1AQ96P16 312 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CDK5RAP1Q96SZ6 601 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TMEM175Q9BSA9 504 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GPR62Q9BZJ7 368 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TASP1Q9H6P5 420 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TLE6Q9H808 572 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 NMRAL1Q9HBL8 299 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 IL37Q9NZH6 218 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 APOBEC2Q9Y235 224 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 NUMBLQ9Y6R0 609 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FNDC1Q4ZHG4 1894 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MIA3Q5JRA6 1907 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SPECC1L-ADORA2AF8WAN1 911 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ENPP3O14638 875 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ITM2AO43736 263 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TLR5O60602 858 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 NBNO60934 754 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SOAT2O75908 522 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ENO1P06733 434 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 HMBSP08397 361 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 F7P08709 466 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 CD151P48509 253 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 POLD2P49005 469 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ALDH18A1P54886 795 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 WNT3AP56704 352 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 IRF9Q00978 393 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 RING1Q06587 406 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SLC12A1Q13621 1099 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DLG2Q15700 870 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PARP15Q460N3 678 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF470Q6ECI4 717 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ESRP1Q6NXG1 681 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 LRRC43Q8N309 656 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TEX9Q8N6V9 391 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PRR11Q96HE9 360 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SCYL1Q96KG9 808 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 B3GALT6Q96L58 329 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF778Q96MU6 729 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 CASD1Q96PB1 797 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 C20orf27Q9GZN8 174 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF358Q9NW07 568 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DNAJC28Q9NX36 388 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MARCH5Q9NX47 278 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TAGLN3Q9UI15 199 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PCDHB12Q9Y5F1 795 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DOCK4Q8N1I0 1966 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 IGLV3-10A0A075B6K4 115 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TBKBP1A7MCY6 615 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 F5H5T6 163 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PITPNM1O00562 1244 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TRIM13O60858 407 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 LMNAP02545 664 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PRKCGP05129 697 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 HAPLN1P10915 354 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 COL6A2P12110 1019 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MYL4P12829 197 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 STMN1P16949 149 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DNAJB1P25685 340 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SLC1A2P43004 574 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MAPKAPK2P49137 400 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 GATMP50440 423 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SERPINH1P50454 418 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 PRKAA2P54646 552 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 RAB10P61026 200 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MXRA7P84157 204 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ASPHQ12797 758 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 POLD3Q15054 466 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TSNAXIP1Q2TAA8 658 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DNAL1Q4LDG9 190 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ALFQ53S48 1182 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 DENND5AQ6IQ26 1287 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 FBXL22Q6P050 247 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 KIAA0408Q6ZU52 694 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 KDELC2Q7Z4H8 507 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF683Q8IZ20 524 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SLC25A41Q8N5S1 370 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 IMP4Q96G21 291 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms