RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZNF354CQ86Y25 554 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 ZSCAN18Q8TBC5 510 aaPredicted RBP13.34□□□□□ -0.27
CTNS-201ENST00000046640 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SORT1Q99523 831 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SLC39A8Q9C0K1 460 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 PDP2Q9P2J9 529 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 TK2O00142 265 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 CFLARO15519 480 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 BUD23O43709 281 aaKnown RBP13.33□□□□□ -0.28
CTNS-201ENST00000046640 OR6B1O95007 311 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 ITGA7Q13683 1181 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 SEPT6Q14141 434 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.28
CTNS-201ENST00000046640 ZNF781Q8N8C0 355 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 APBB2Q92870 758 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 FICDQ9BVA6 458 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 AK5Q9Y6K8 562 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 A0A1W2PQH9 124 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.33□□□□□ -0.28
CTNS-201ENST00000046640 NCAM2O15394 837 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 TBX18O95935 607 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 SERPINE1P05121 402 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 CRABP2P29373 138 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 LIMK2P53671 638 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MAXP61244 160 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MPP1Q00013 466 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MGAT3Q09327 533 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MED21Q13503 144 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 ITPRIPL1Q6GPH6 555 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 ESRP1Q6NXG1 681 aaKnown RBP13.33□□□□□ -0.28
CTNS-201ENST00000046640 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 ACMSDQ8TDX5 336 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 SGF29Q96ES7 293 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 PGAP3Q96FM1 320 aaPredicted RBP13.33□□□□□ -0.28
CTNS-201ENST00000046640 OSER1Q9NX31 292 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 CDH22Q9UJ99 828 aa13.33□□□□□ -0.28
CTNS-201ENST00000046640 RTN3O95197 1032 aaPredicted RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 HSPA4LO95757 839 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 IL1BP01584 269 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 HMBSP08397 361 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TSPY1Q01534 308 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 ITKQ08881 620 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TBL3Q12788 808 aaKnown RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 TUSC3Q13454 348 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TTC9BQ8N6N2 239 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 PPP2R3CQ969Q6 453 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 NMD3Q96D46 503 aaKnown RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TASP1Q9H6P5 420 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 CCDC160A6NGH7 325 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 DDHD2O94830 711 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 CHRNGP07510 517 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 OR1G1P47890 313 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 HCAR3P49019 387 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 SERPINB8P50452 374 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 AIF1P55008 147 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 ABCE1P61221 599 aaKnown RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 CDH17Q12864 832 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 MSLNQ13421 630 aaPredicted RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 PRPSAP1Q14558 356 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 USP10Q14694 798 aaKnown RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 SLC9B1Q4ZJI4 515 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 SCD5Q86SK9 330 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 SATL1Q86VE3 508 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 SLC41A1Q8IVJ1 513 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 MARK4Q96L34 752 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TRAPPC9Q96Q05 1148 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 OMDQ99983 421 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 WDR55Q9H6Y2 383 aaPredicted RBP13.32□□□□□ -0.28
CTNS-201ENST00000046640 RBM22Q9NW64 420 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTNS-201ENST00000046640 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TRHDEQ9UKU6 1024 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 POMPQ9Y244 141 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 TSC2P49815 1807 aa13.32□□□□□ -0.28
CTNS-201ENST00000046640 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 CCL22O00626 93 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 IRAK2O43187 625 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 AOC1P19801 751 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 ITGAXP20702 1163 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 CNGA3Q16281 694 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 PPM1LQ5SGD2 360 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 FAM219BQ5XKK7 198 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 PDSS2Q86YH6 399 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 MIB1Q86YT6 1006 aa13.31□□□□□ -0.28
CTNS-201ENST00000046640 KCTD4Q8WVF5 259 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms