RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ATOH1Q92858 354 aaPredicted RBP12.24□□□□□ -0.45
SYPL1-201ENST00000011473 CEP44Q9C0F1 390 aa12.24□□□□□ -0.45
SYPL1-201ENST00000011473 ZDHHC6Q9H6R6 413 aa12.24□□□□□ -0.45
SYPL1-201ENST00000011473 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
SYPL1-201ENST00000011473 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
SYPL1-201ENST00000011473 WDR87Q6ZQQ6 2873 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 KRIT1O00522 736 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 KCNK3O14649 394 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 INSIG1O15503 277 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 LEFTY1O75610 366 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 ACADMP11310 421 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 CHRNA3P32297 505 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 SLC8A1P32418 973 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 TPMTP51580 245 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 NRLP54845 237 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 AP1B1Q10567 949 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 LBRQ14739 615 aaKnown RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 ZNF776Q68DI1 518 aaPredicted RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 ADAT2Q7Z6V5 191 aaKnown RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 WDR5BQ86VZ2 330 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PGBD5Q8N414 524 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 OR2AP1Q8NGE2 309 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 OR8D1Q8WZ84 308 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 P3H4Q92791 437 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 VOPP1Q96AW1 172 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 OLFM3Q96PB7 478 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PRRX2Q99811 253 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 CINPQ9BW66 212 aaPredicted RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 EVLQ9UI08 416 aaPredicted RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PPM1HQ9ULR3 514 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 A0A1W2PP55 124 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 KPNA3O00505 521 aaPredicted RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 RNASEH1O60930 286 aaKnown RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 RPP40O75818 363 aaKnown RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 DNTTP04053 509 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 MX2P20592 715 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 BCKDHBP21953 392 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PTPN5P54829 565 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 COPS2P61201 443 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 BBS12Q6ZW61 710 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 AADATQ8N5Z0 425 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 DEFB119Q8N690 84 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 ISG20Q96AZ6 181 aaKnown RBP12.23□□□□□ -0.45
SYPL1-201ENST00000011473 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 PHOX2BQ99453 314 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 WASF2Q9Y6W5 498 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 LAMA1P25391 3075 aa12.23□□□□□ -0.45
SYPL1-201ENST00000011473 NUP205Q92621 2012 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CHD5Q8TDI0 1954 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 KIF5CO60282 957 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 RNASEH2AO75792 299 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PIGNO95427 931 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 TGM2P21980 687 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 SNRPD1P62314 119 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PPIDQ08752 370 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 ZNF235Q14590 738 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 USP39Q53GS9 565 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 ACTL9Q8TC94 416 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 GANCQ8TET4 914 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CCDC114Q96M63 670 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 GDAP1L1Q96MZ0 367 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 FAM126AQ9BYI3 521 aaPredicted RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 NT5MQ9NPB1 228 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 FBXL12Q9NXK8 326 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 SEPT10Q9P0V9 454 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 IL36AQ9UHA7 158 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PCDHGA2Q9Y5H1 932 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CKAP5Q14008 2032 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CCDC163A0A0D9SF12 145 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 FAM47DPA6NHR8 397 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 APOC2P02655 101 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 ATP1A1P05023 1023 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 UGT2B4P06133 528 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CCNCP24863 283 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 ACSL1P33121 698 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PTPN7P35236 360 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 DRD3P35462 400 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 P2RY2P41231 377 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 MMP13P45452 471 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 SCNN1BP51168 640 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 OTUD4Q01804 1114 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 ZBTB17Q13105 803 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PDK1Q15118 436 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 MYLK3Q32MK0 819 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PRR23BQ6ZRT6 265 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 HDDC3Q8N4P3 179 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CASKIN2Q8WXE0 1202 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 PSKH2Q96QS6 385 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 HEPHQ9BQS7 1158 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms