RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CYLC2Q14093 348 aaPredicted RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 DMC1Q14565 340 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 C10orf53Q8N6V4 93 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC4A11Q8NBS3 891 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 STAG3L4Q8TBR4 150 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 FNIP1Q8TF40 1166 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 APOPT1Q96IL0 206 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 SPACA7Q96KW9 195 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 LGMNQ99538 433 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 CPQQ9Y646 472 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 A0A1B0GVM2 712 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 TCAF2A6NFQ2 919 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 RPL22P35268 128 aaKnown RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 SOX11P35716 441 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 PDE1CQ14123 709 aaPredicted RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 PLEKHA7Q6IQ23 1121 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC44A2Q8IWA5 706 aaPredicted RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 DPY30Q9C005 99 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 MID1IP1Q9NPA3 183 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 ANKDD1BA6NHY2 528 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 E9PAM4 449 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 VPS4BO75351 444 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 SNAI1O95863 264 aaPredicted RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 PIGRP01833 764 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 EPHX1P07099 455 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 PPP2R1BP30154 601 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 NFYCQ13952 458 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 STARD8Q92502 1023 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 BPIFA1Q9NP55 256 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 TBC1D30Q9Y2I9 924 aa10.48□□□□□ -0.73
NIPAL3-201ENST00000003912 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 UBDO15205 165 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ZSCAN5DPP0CG00 497 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CTPS1P17812 591 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 HNRNPH2P55795 449 aaKnown RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TRIP4Q15650 581 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ARL14EPQ8N8R7 260 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 LRRC19Q9H756 370 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC35G4P0C7Q5 338 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TSHRP16473 764 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SERPINB5P36952 375 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 MSLNQ13421 630 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 FUT11Q495W5 492 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TIGD5Q53EQ6 642 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 POTEHQ6S545 545 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 USP6NLQ92738 828 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CERS2Q96G23 380 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 DPEP3Q9H4B8 488 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PHPT1Q9NRX4 125 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SCHIP1Q9P0W5 487 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PCYOX1Q9UHG3 505 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ERVW-1Q9UQF0 538 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC27A6Q9Y2P4 619 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 BUD23O43709 281 aaKnown RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 LTA4HP09960 611 aaKnown RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 BGNP21810 368 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PTPN9P43378 593 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 AQP5P55064 265 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 NAA20P61599 178 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 GRSF1Q12849 480 aaKnown RBP eCLIP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ARHGAP17Q68EM7 881 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ZNF662Q6ZS27 426 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 KRT78Q8N1N4 520 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 COPS8Q99627 209 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 KRT87PA6NCN2 255 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC25A14O95258 325 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 FAM163BP0C2L3 166 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 MAPKAPK2P49137 400 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 WNT3AP56704 352 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TAS2R40P59535 323 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PLIN5Q00G26 463 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PMF1Q6P1K2 205 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CYP20A1Q6UW02 462 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CREG2Q8IUH2 290 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 LRRC34Q8IZ02 419 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 EME1Q96AY2 570 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 HEY2Q9UBP5 337 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PER2O15055 1255 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CAP1Q01518 475 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 GALNT3Q14435 633 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 ATAD3BQ5T9A4 648 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 KLHL35Q6PF15 583 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 FAM43BQ6ZT52 329 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CYP4Z1Q86W10 505 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SIAH1Q8IUQ4 282 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 C12orf50Q8NA57 414 aaPredicted RBP10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 TADA1Q96BN2 335 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 PCDHB18PQ96TA0 734 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 HGH1Q9BTY7 390 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 GLOD4Q9HC38 313 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 CLDND1Q9NY35 253 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms