RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dnajb5O89114 348 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Il3P01586 166 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 DnttP09838 530 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Psmd3P14685 530 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 BpgmP15327 259 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hoxd12P23812 268 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tbc1d24Q3UUG6 561 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Arcn1Q5XJY5 511 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cep78Q6IRU7 790 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tatdn1Q6P8M1 295 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Efr3aQ8BG67 819 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nup107Q8BH74 926 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm4922Q8C0N0 497 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tmem154Q8C4Q9 181 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Pars2Q8CFI5 475 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Commd10Q8JZY2 202 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Angel2Q8K1C0 544 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Slc8a2Q8K596 921 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Zc3h10Q8R205 435 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Kdm8Q9CXT6 414 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cpxm2Q9D2L5 764 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Usp12Q9D9M2 370 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mettl15Q9DCL4 406 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Strn3Q9ERG2 796 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Sgk1Q9WVC6 431 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Aldh18a1Q9Z110 795 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm572B1ARY8 399 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Siah3B2RWG3 268 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Eif3dO70194 548 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Serpinh1P19324 417 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 LdlrP35951 862 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rad52P43352 420 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Krt76Q3UV17 594 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Chi3l1Q61362 389 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Hspa1aQ61696 641 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp4b1Q64462 511 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm2163Q6PCY5 473 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm7247Q6UY52 187 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 SyncripQ7TMK9 623 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Btnl9Q8BJE2 536 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nckap1lQ8K1X4 1134 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Kdm4bQ91VY5 1086 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rbm47Q91WT8 590 aaKnown RBP9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mad2l2Q9D752 211 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 NapaQ9DB05 295 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ndst3Q9EQH7 873 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cxcl11Q9JHH5 100 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Acsl4Q9QUJ7 711 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Enpp2Q9R1E6 862 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tbk1Q9WUN2 729 aa9.86□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 XdhQ00519 1335 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Plcg1Q62077 1302 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Arhgef10Q8C033 1345 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rrn3B2RS91 656 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mtx3D3YTP3 312 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ccnb1ip1D3Z3K2 276 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Apol11aE9PZG0 334 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ccdc85cE9Q6B2 420 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cyp2j8G3UZ38 503 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Elk3P41971 409 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 GalcP54818 684 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Siah1aP61092 282 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Lypla1P97823 230 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 OxtrP97926 388 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 HmgcrQ01237 887 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Krt80Q0VBK2 452 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Psd3Q2PFD7 1037 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Acot6Q32Q92 419 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Shcbp1lQ3TTP0 639 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ifit1bl2Q3U687 466 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ugt2b36Q3UEP4 530 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Clca4aQ6Q473 924 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Far2Q7TNT2 515 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mis18bp1Q80WQ8 998 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Clec2eQ80XD9 204 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Creb3l2Q8BH52 521 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Fbxo28Q8BIG4 368 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Traf7Q922B6 594 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Fbxo16Q9QZM9 334 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm43951A0A0N4SUT6 962 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Tmem233D3Z1U7 110 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Smim18J3QNP2 93 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 CaluO35887 315 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ppm1bP36993 390 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Rpl10aP53026 217 aaKnown RBP9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Nek10Q3UGM2 1111 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Q3UJP5 209 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Gm11992Q5SS90 291 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 BadQ61337 204 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Esco1Q69Z69 843 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Best3Q6H1V1 669 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Xpo1Q6P5F9 1071 aaKnown RBP9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Mfn2Q80U63 757 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Ip6k2Q80V72 448 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Cstf2Q8BIQ5 580 aaKnown RBP9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Dcun1d2Q8BZJ7 259 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Alas1Q8VC19 642 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Sult5a1Q91X36 291 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Desi1Q9CQT7 168 aa9.85□□□□□ -0.83
Hmgb1-201ENSMUST00000085546 Serpina9Q9D7D2 418 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms