RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Fam163bQ8BUM6 167 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Parp9Q8CAS9 866 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dusp19Q8K4T5 220 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Caap1Q8VDY9 356 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Catsper1Q91ZR5 686 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Xpo6Q924Z6 1125 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tlcd1Q99JT6 247 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PolhQ9JJN0 694 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tjp2Q9Z0U1 1167 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kif26aQ52KG5 1881 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Btbd18A0A0A6YY25 723 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Il17dA0A0B4J1G4 205 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm11758A2BEI6 360 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm11757A2BEI8 360 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kif6E9PX57 802 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Edil3O35474 480 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mybpc3O70468 1270 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Shoc2O88520 582 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Klra1P20937 262 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cd247P24161 164 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 H2afxP27661 143 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AcadmP45952 421 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 E2f2P56931 443 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Eif3eP60229 445 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 PrkcgP63318 697 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Adcy8P97490 1249 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rgs9bpQ148R9 237 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm10488Q4KL05 212 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ddx3yQ62095 658 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Znf513Q6PD29 541 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Kbtbd3Q8BHI4 607 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zfp595Q8BIN6 625 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zbtb33Q8BN78 671 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Csnk1g1Q8BTH8 459 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Q8CC96 669 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Spdye4bQ8CDE8 236 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Klhl36Q8R124 613 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Usp15Q8R5H1 981 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zdhhc12Q8VC90 267 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Epn3Q91W69 636 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Eps8l2Q99K30 729 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 March2Q99M02 246 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Utp11Q9CZJ1 253 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam3aQ9D8T0 230 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Sertad3Q9ERC3 197 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rdh14Q9ERI6 334 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ank3G5E8K5 1961 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Atg2bQ80XK6 2075 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mroh7A2AVR2 1279 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 4930558K02RikE0CXC6 182 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Vmn1r176G3UW31 304 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pabpc1P29341 636 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Foxp2P58463 714 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Crnkl1P63154 690 aaKnown RBP7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pdcd1Q02242 288 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pid1Q3UBG2 217 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Clec2eQ80XD9 204 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fbxo38Q8BMI0 1194 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Defb22Q8BVC1 179 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 DrgxQ8BYH0 263 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trip10Q8CJ53 603 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ipo11Q8K2V6 975 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 MfrpQ8K480 584 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Olfr589Q8VGV8 317 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Sh3d19Q91X43 789 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trps1Q925H1 1281 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Q9CR55 154 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Prpsap1Q9D0M1 356 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 MceeQ9D1I5 178 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf225Q9D7D1 332 aa7.01□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Myo5aQ99104 1853 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 6720489N17RikA0A1Y7VJW0 127 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AspgA0JNU3 564 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 P01648 108 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mucl2P02815 138 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ddx6P54823 483 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Uba1Q02053 1058 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SpdyaQ5IBH7 310 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tbx2Q60707 711 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cyp3a13Q64464 503 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 CapslQ6P8Y1 208 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ccdc154Q6RUT8 657 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fnip2Q80TD3 1108 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pnma8aQ80VM8 430 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fbxw7Q8VBV4 629 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 IscuQ9D7P6 168 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Habp4Q9JKS5 411 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dbn1Q9QXS6 706 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rpl9-ps1S4R1R7 191 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zfp40B1B1D3 796 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SelenovD3YXG1 328 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ctbp1O88712 441 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pou5f1P20263 352 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SykP48025 629 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Colec11Q3SXB8 272 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fbxo39Q5NBU5 443 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Wbp4Q61048 376 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AtminQ6P9S1 818 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ric8bQ80XE1 520 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Vmn2r43Q80Z08 845 aa7□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms