RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr1037Q7TR84 321 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Phf24Q80TL4 400 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Q8BGA7 448 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Dmtf1Q8CE22 761 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Adam32Q8K410 754 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gtf2ird2Q99NI3 936 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Drg2Q9QXB9 364 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tnfrsf25B1AWN9 411 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fgfr2P21803 821 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 LipeP54310 759 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Lamtor4Q8CF66 99 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Lsm14aQ8K2F8 462 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 GhdcQ99J23 532 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ecrg4Q99LS0 148 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 HnrnpdlQ9Z130 301 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 MbP04247 154 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ythdf1P59326 559 aaKnown RBP16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pdss1Q33DR2 409 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 XiapQ60989 496 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ca9Q8VHB5 437 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pcdhb10Q91VE5 797 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Txndc12Q9CQU0 170 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nphs1Q9QZS7 1256 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cyb561d2Q9WUE3 222 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 IdsQ08890 552 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rtkn2Q14B46 604 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 AW551984Q8BGF0 804 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 SowahdQ8BY98 327 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Btbd9Q8C726 612 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Armcx6Q8K3A6 301 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Zdhhc3Q8R173 299 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ndufb5Q9CQH3 189 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PolkQ9QUG2 852 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vmn2r63E9Q0K5 859 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm9268E9Q0M3 861 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vmn2r62K7N712 859 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc6a2O55192 617 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Glud1P26443 558 aaKnown RBP16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Alg10bQ3UGP8 474 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Abi3bpQ59IW6 1179 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Kctd3Q8BFX3 815 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PstkQ8BP74 359 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Commd2Q8BXC6 199 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pcdhb17Q91VD8 799 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Krt81Q9ERE2 481 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tjp3Q9QXY1 905 aa16.77■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm17175E9Q528 179 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TpteG5E8H5 664 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Serpinb9cI7HJI5 387 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Acot1O55137 419 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Il12bP43432 335 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Shroom1Q5SX79 823 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Arhgap28Q8BN58 729 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gjd3Q91YD1 278 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cyp2j12G3UXT0 502 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rfx2P48379 717 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ubqln2Q9QZM0 638 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr564E9PWA8 316 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vbp1P61759 196 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 LvrnQ2KHK3 559 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cyp4b1Q64462 511 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Aste1Q8BIR2 672 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 FsbpQ8BKE5 299 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Piwil1Q9JMB7 862 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 CkmP07310 381 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tespa1Q3U132 458 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc29a2Q61672 456 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cd34Q64314 382 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cyp2s1Q9DBX6 501 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nrf1Q9WU00 503 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm8180E9PXN0 145 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TsxP70675 144 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 OgnQ62000 298 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Spon2Q8BMS2 330 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Scnn1bQ9WU38 638 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ms4a14A0A087WSD2 1232 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rgs16P97428 201 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Klhl6Q6V595 619 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Wdr64Q9D565 1086 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm5737A0A140LI11 423 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rgsl1H3BL40 1073 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Itga2Q62469 1178 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TufmQ8BFR5 452 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Q8BH50 245 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prl7b1Q8CGZ9 251 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pih1d2Q8CHR9 315 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ace2Q8R0I0 805 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Lars2Q8VDC0 902 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Asb6Q91ZU1 418 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cables1Q9ESJ1 568 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 YdjcQ14BV6 310 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Itih2Q61703 946 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Msh4Q99MT2 958 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 H2afb2S4R1M3 115 aa16.76■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Khdc4Q3TCX3 612 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Shc3Q61120 474 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 D630039A03RikQ8K0M7 236 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rsph1Q8VIG3 301 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Armc8Q9DBR3 673 aa16.75■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prdm12A2AJ77 365 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms