RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ppp2r2bQ6ZWR4 443 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Olfr792Q7TRH9 311 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ap3s2Q8BSZ2 193 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Wrap53Q8VC51 532 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ropn1Q9ESG2 212 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Slc6a16A0A1L1SR47 742 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm6337K7N6X9 211 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm3115L7N285 211 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gadd45aP48316 165 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ap1s1P61967 158 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pfkfb2P70265 519 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Soat1Q61263 540 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Sema5aQ62217 1077 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rcn3Q8BH97 328 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Bdh2Q8JZV9 245 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dusp19Q8K4T5 220 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fbxo32Q9CPU7 355 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Spaca1Q9DA48 305 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ube2ql1A0PJN4 161 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kpna3O35344 521 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Elk3P41971 409 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cnpy4Q8BQ47 245 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kat5Q8CHK4 513 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prmt5Q8CIG8 637 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 AagabQ8R2R3 316 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Znf687Q9D2D7 1237 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gyg1Q9R062 333 aa14.1□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm45233A0A0N4SVE0 221 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gucy2dA0A0U1RPR8 1117 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ntrk1Q3UFB7 799 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm813Q3UWK9 176 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zdhhc17Q80TN5 632 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Pop1Q8K205 1045 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Colec12Q8K4Q8 742 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gprc5bQ923Z0 410 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Prg3Q9JL95 222 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 MycsQ9Z304 431 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm8180E9PXN0 145 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm8871F7AXK2 190 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CcncQ62447 283 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 FsbpQ8BKE5 299 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ttc36Q8VBW8 186 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cep72Q9D3R3 646 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Capn1O35350 713 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 AvilO88398 819 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 BgnP28653 369 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp560Q3URI6 754 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CttnQ60598 546 aaKnown RBP14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Klhl6Q6V595 619 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 NrcamQ810U4 1256 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dmtf1Q8CE22 761 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Aldh4a1Q8CHT0 562 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Eps8l2Q99K30 729 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rilpl2Q99LE1 197 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ist1Q9CX00 362 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tmem59Q9QY73 323 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Clcn2Q9R0A1 908 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fut8Q9WTS2 575 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 MthfrQ9WU20 654 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 CercamA3KGW5 592 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Klhl3E0CZ16 587 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Slc16a2O70324 545 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nedd1P33215 660 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cyth4Q80YW0 393 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ythdf3Q8BYK6 585 aaKnown RBP14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nuak2Q8BZN4 639 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Lrif1Q8CDD9 755 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Nphs2Q91X05 385 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Slc13a3Q91Y63 600 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Dcun1d5Q9CXV9 237 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Smok3cA0A087WSF2 504 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp712E9PXJ4 705 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Kdelc2G5E897 503 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rcsd1Q3UZA1 412 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Mxd4Q60948 209 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Fam214aQ69ZK7 1075 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Psd2Q6P1I6 770 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Calm5Q6W3E0 140 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Afg3l2Q8JZQ2 802 aaKnown RBP14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Bmp10Q9R229 421 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 DgkhD3YXJ0 1156 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Il4i1O09046 630 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Tespa1Q3U132 458 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Rnft2Q3UF64 445 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zzz3Q6KAQ7 910 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Slc5a5Q99PN0 618 aa14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 AfdnQ9QZQ1 1820 aaKnown RBP14.09□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Unc5cO08747 931 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Yap1P46938 488 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Cyp2j13Q3UNV4 503 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Zfp280bQ505F4 534 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Snrpb2Q9CQI7 225 aaKnown RBP14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 MipepA6H611 711 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gm2888K7N746 267 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Gon7P0C8B4 98 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Idh2P54071 452 aaKnown RBP14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Atl1Q8BH66 558 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 Ttc24Q8BYG0 334 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 PrkxQ922R0 355 aa14.08□□□□□ -0.15
Col5a1-201ENSMUST00000028280 NamptQ99KQ4 491 aa14.08□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms