RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Nup205A0A0J9YUD5 2061 aaKnown RBP16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Cyp2b10P12791 500 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Aldh3a1P47739 453 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Ripply1Q2WG77 201 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Myo1gQ5SUA5 1024 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Brsk2Q69Z98 735 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc18a2Q8BRU6 517 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Zfp398Q8BV16 643 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 HpdlQ8K248 371 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Ipo11Q8K2V6 975 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Serbp1Q9CY58 407 aaKnown RBP16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Timp4Q9JHB3 224 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Kdelc1Q9JHP7 502 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Ppp2r3cQ9JK24 453 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Vmn2r17E9PYF5 849 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 CenpaO35216 134 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 RapsnP12672 412 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Atp5bP56480 529 aaKnown RBP16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc22a16Q497L8 649 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gpr65Q61038 337 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Rpl10Q6ZWV3 214 aaKnown RBP16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Dnajb13Q80Y75 316 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Pan2Q8BGF7 1200 aaKnown RBP16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Zmiz2Q8CIE2 920 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Zbtb8bQ8CII0 484 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gmpr2Q99L27 348 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Ampd2Q9DBT5 798 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Paqr5Q9DCU0 330 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Tspan3Q9QY33 253 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Fiz1Q9WTJ4 500 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Mkrn2osD3Z393 217 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 FancfE9Q5Z5 343 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 IkbkgO88522 412 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gstt1Q64471 240 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Pqlc1Q80XM9 271 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Ptk7Q8BKG3 1062 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Tbc1d17Q8BYH7 645 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Fam204aQ8C6C7 236 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Snrnp27Q8K194 155 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Snx9Q91VH2 595 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Cyp4f14Q9EP75 524 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Arih2Q9Z1K6 492 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Map7d3A2AEY4 876 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcsk6F6XJP7 959 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Hmgxb3G3X9M3 1254 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Pot1bH7BX60 640 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Znf683I7HJS4 458 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gm7942L7N277 499 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Matn2O08746 956 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Fam129aQ3UW53 926 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Efr3bQ6ZQ18 817 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Clec18aQ7TSQ1 534 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 RubcnQ80U62 956 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gtf3c4Q8BMQ2 817 aaKnown RBP16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Cndp1Q8BUG2 492 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 OsgepQ8BWU5 335 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Castor2Q8CAB8 329 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Snx8Q8CFD4 459 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 TwnkQ8CIW5 685 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Ssh3Q8K330 649 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 MiosQ8VE19 875 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Zdhhc7Q91WU6 308 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Chit1Q9D7Q1 464 aa16.65■□□□□ 0.26
Shh-201ENSMUST00000002708 Gm13276A0A087WR18 182 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Pex10B1AUE5 324 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Kcnt2D3Z649 1135 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Hsd17b7O88736 334 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Usp46P62069 366 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Clhc1Q5M6W3 596 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr464Q5SW48 313 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Sema3cQ62181 751 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Galnt10Q6P9S7 603 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Usp43Q8BUM9 1132 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn1r191Q8K4D0 298 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 HnmtQ91VF2 295 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Smim14Q91VT8 99 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Mrpl57Q9CQF8 102 aaKnown RBP16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 C7D3YXF5 845 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Pdia2D3Z6P0 527 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Ap2a1P17426 977 aaKnown RBP16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Fbxw11Q5SRY7 542 aaKnown RBP16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Arhgap11aQ80Y19 987 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Dyrk4Q8BI55 632 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Nup93Q8BJ71 819 aaKnown RBP16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Slc41a1Q8BJA2 512 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Stx16Q8BVI5 326 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Clptm1lQ8BXA5 539 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Iqsec1Q8R0S2 961 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Pcolce2Q8R4W6 414 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Tbc1d19Q8VDV7 526 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr1325Q8VF43 315 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Pcdhb13Q91Y06 796 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Asap1Q9QWY8 1147 aa16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 VarsQ9Z1Q9 1263 aaKnown RBP16.64■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r55G3UWZ4 781 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r53L7N473 806 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Slc2a7P0C6A1 513 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Gabrb3P63080 473 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Tmem207P86045 143 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Grm5Q3UVX5 1203 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms