RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TJP3O95049 919 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 SYPP08247 313 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ERCC2P18074 760 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 AMPD1P23109 780 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 PAFAH1B1P43034 410 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 IFNAR2P48551 515 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 HCAR3P49019 387 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 IRAK1P51617 712 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 SGSHP51688 502 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ADCY2Q08462 1091 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 SLC14A1Q13336 389 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 KLF1Q13351 362 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TUBB2AQ13885 445 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 RABGAP1LQ5R372 815 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ARTNQ5T4W7 220 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TTC39BQ5VTQ0 682 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 SLC9A4Q6AI14 798 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 BBS12Q6ZW61 710 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 PCDH19Q8TAB3 1148 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ADAMTS14Q8WXS8 1223 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ATP2A3Q93084 1043 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 IGSF8Q969P0 613 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 HAUS1Q96CS2 278 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 NAP1L3Q99457 506 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TUBB2BQ9BVA1 445 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ZYG11BQ9C0D3 744 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CATSPERBQ9H7T0 1116 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 ETNK2Q9NVF9 386 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 MPP6Q9NZW5 540 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 STIM2Q9P246 746 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 PPARGC1AQ9UBK2 798 aaKnown RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 RNF14Q9UBS8 474 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-228ENST00000641847 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 CFAP46Q8IYW2 2715 aa9.63□□□□□ -0.87
PHGDH-228ENST00000641847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 CAPN8A6NHC0 703 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 GFRA2O00451 464 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 KRIT1O00522 736 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 SLC9A3R1O14745 358 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 MFSD11O43934 449 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 CNTN5O94779 1100 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 ZFXP17010 805 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 RHOQP17081 205 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 BCKDHBP21953 392 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TGM2P21980 687 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 GJA4P35212 333 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 CHKAP35790 457 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 RPS24P62847 133 aaKnown RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 C5orf22Q49AR2 442 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 ALFQ53S48 1182 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TMCO3Q6UWJ1 677 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 NPNTQ6UXI9 565 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TPGS1Q6ZTW0 290 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 ARMCX6Q7L4S7 300 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TFAP2DQ7Z6R9 452 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 RASSF3Q86WH2 238 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TMEFF1Q8IYR6 380 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 PLD5Q8N7P1 536 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 KIAA1958Q8N8K9 716 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 RTL3Q8N8U3 475 aaKnown RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 HJURPQ8NCD3 748 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 MDM1Q8TC05 714 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 OSCP1Q8WVF1 389 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 SLC39A7Q92504 469 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 CHFRQ96EP1 664 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 PRDM16Q9HAZ2 1276 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 HPS4Q9NQG7 708 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TMEM248Q9NWD8 314 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 DUS2Q9NX74 493 aaKnown RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 TBC1D14Q9P2M4 693 aa9.62□□□□□ -0.87
PHGDH-228ENST00000641847 R3HDM2Q9Y2K5 976 aaKnown RBP9.62□□□□□ -0.87
PHGDH-228ENST00000641847 ZNF462Q96JM2 2506 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 DOCK4Q8N1I0 1966 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 GOLGA6L10A0A0M3HER8 536 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 A0A1B0GVM2 712 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 TCAF2A6NFQ2 919 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 WASH4PA8MWX3 477 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 APOC4-APOC2K7ER74 178 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 TBL1XO60907 577 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 APOC2P02655 101 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 CYBBP04839 570 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 SERPINF2P08697 491 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 FTH1P19P0C7X4 201 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 SERPINB6P35237 376 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 CDH4P55283 916 aa9.61□□□□□ -0.87
PHGDH-228ENST00000641847 OTUD4Q01804 1114 aaKnown RBP9.61□□□□□ -0.87
PHGDH-228ENST00000641847 GBE1Q04446 702 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms