RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ZNF558Q96NG5 402 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 ANKRD27Q96NW4 1050 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 KCTD15Q96SI1 283 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-223ENST00000640640 HNRNPABQ99729 332 aaKnown RBP17.8■□□□□ 0.44
SCARB2-223ENST00000640640 OMDQ99983 421 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 PIF1Q9H611 641 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 SCHIP1Q9P0W5 487 aaPredicted RBP17.8■□□□□ 0.44
SCARB2-223ENST00000640640 C15orf41Q9Y2V0 281 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
SCARB2-223ENST00000640640 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
SCARB2-223ENST00000640640 MSI1O43347 362 aaKnown RBP17.79■□□□□ 0.44
SCARB2-223ENST00000640640 ASGR1P07306 291 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 ELNP15502 786 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GRIA4P48058 902 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CLCNKBP51801 687 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 SLC39A4Q6P5W5 647 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-223ENST00000640640 STK40Q8N2I9 435 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 DPY30Q9C005 99 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 RNPEPL1Q9HAU8 725 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 A8MX80 341 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CYP3A5P20815 502 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GPD2P43304 727 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 RAP1GDS1P52306 607 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CAMK2GQ13555 558 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-223ENST00000640640 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 FNBP1LQ5T0N5 605 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CERCAMQ5T4B2 595 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GPSM1Q86YR5 675 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 EXOC2Q96KP1 924 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 ARHGEF4Q9NR80 690 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CLCA2Q9UQC9 943 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GNG14A0A1W2PPG7 69 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 MGAT4DA6NG13 374 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 OR6C75A6NL08 312 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 TMEM114B3SHH9 223 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 HDAC3O15379 428 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 FGFR1P11362 822 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 SERPINA4P29622 427 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 LRRC8BQ6P9F7 803 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 TMEM159Q96B96 161 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 MLPHQ9BV36 600 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GLOD4Q9HC38 313 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 XPR1Q9UBH6 696 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 GABRB2P47870 512 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 C11orf96Q7Z7L8 435 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 FAM126BQ8IXS8 530 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 SPPL2BQ8TCT7 592 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 CASP10Q92851 521 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 PANX3Q96QZ0 392 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 HGH1Q9BTY7 390 aa17.79■□□□□ 0.44
SCARB2-223ENST00000640640 OR4Q2P0C623 313 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 ARHGAP1Q07960 439 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SLC1A5Q15758 541 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 USP41Q3LFD5 358 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 TBCELQ5QJ74 424 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 IYDQ6PHW0 289 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 LRRC74BQ6ZQY2 392 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SLC24A5Q71RS6 500 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 MILR1Q7Z6M3 343 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 ATAD1Q8NBU5 361 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 KLHL5Q96PQ7 755 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 CYLDQ9NQC7 956 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 MRPL17Q9NRX2 175 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 ZNF112Q9UJU3 913 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 LRCH1Q9Y2L9 728 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 KIF1CO43896 1103 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 MSH3P20585 1137 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 CDK18Q07002 472 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 FRG1Q14331 258 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 FAM45BPQ6NSW5 357 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 VSTM1Q6UX27 236 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 MIER2Q8N344 545 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 FAM45AQ8TCE6 357 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 PRDM4Q9UKN5 801 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 KDM1AO60341 852 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 USP1O94782 785 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 LMO2P25791 158 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 PSMD5Q16401 504 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 DQX1Q8TE96 717 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 AGAP11Q8TF27 550 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 DIS3LQ8TF46 1054 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 MINDY3Q9H8M7 445 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SCN3BQ9NY72 215 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 LNPEPQ9UIQ6 1025 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 FOXO6A8MYZ6 492 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 C2P06681 752 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 ALOX15P16050 662 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SLC25A3Q00325 362 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 PGS1Q32NB8 556 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 NKAPQ8N5F7 415 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 CCDC185Q8N715 623 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 PTGR2Q8N8N7 351 aaPredicted RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 HDAC10Q969S8 669 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 FAM120BQ96EK7 910 aaKnown RBP17.78■□□□□ 0.44
SCARB2-223ENST00000640640 PCED1BQ96HM7 432 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 SEMA4BQ9NPR2 832 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms