RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PRO3102	Q9H379	93 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	RETREG1	Q9H6L5	497 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	PDF	Q9HBH1	243 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	VPS28	Q9UK41	221 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	MAD1L1	Q9Y6D9	718 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	TEX264	Q9Y6I9	313 aa		10.65	□□□□□ -0.7
NECAP1-223	ENST00000640091	NEDD8-MDP1	E9PL57	170 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CACNG3	O60359	315 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	PMPCB	O75439	489 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZNF189	O75820	626 aa	Predicted RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	AP2A1	O95782	977 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	AGT	P01019	485 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	NUDT17	P0C025	328 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	TPH1	P17752	444 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	SARNP	P82979	210 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	DSC2	Q02487	901 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	GPS2	Q13227	327 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	PRPSAP1	Q14558	356 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	IHH	Q14623	411 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	LONRF1	Q17RB8	773 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	HSP90B2P	Q58FF3	399 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	FAM78A	Q5JUQ0	283 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	FYB2	Q5VWT5	728 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	KCTD16	Q68DU8	428 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	ANKRD54	Q6NXT1	300 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CEP128	Q6ZU80	1094 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	RNF135	Q8IUD6	432 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	NPAS3	Q8IXF0	933 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	TEX26	Q8N6G2	289 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	EFHB	Q8N7U6	833 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	DNAAF3	Q8N9W5	541 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	IPMK	Q8NFU5	416 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	SIGLEC10	Q96LC7	697 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	FCRL5	Q96RD9	977 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	PRUNE2	Q8WUY3	3088 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	SOBP	A7XYQ1	873 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	MT-CO1	P00395	513 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CYBB	P04839	570 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	MGAT1	P26572	445 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CD70	P32970	193 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	MAGEA3	P43357	314 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	ARF5	P84085	180 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CDK16	Q00536	496 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	NIPAL4	Q0D2K0	466 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	GRIN2C	Q14957	1233 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	PCSK7	Q16549	785 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CCDC38	Q502W7	563 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	LY6G5C	Q5SRR4	150 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	TRIM68	Q6AZZ1	485 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CASC4	Q6P4E1	433 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	LRRC8B	Q6P9F7	803 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	LRIG3	Q6UXM1	1119 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	TMEM184A	Q6ZMB5	413 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	PRPF39	Q86UA1	669 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CELF5	Q8N6W0	485 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	GOLGA6L1	Q8N7Z2	621 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	EPS8L3	Q8TE67	593 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	IRF7	Q92985	503 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	MRRF	Q96E11	262 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CFAP36	Q96G28	342 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	EXOC2	Q96KP1	924 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	SH3GL2	Q99962	352 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	BBS2	Q9BXC9	721 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	EIF2B3	Q9NR50	452 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	DZANK1	Q9NVP4	752 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	OGFR	Q9NZT2	677 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	CLEC1B	Q9P126	229 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	AAR2	Q9Y312	384 aa	Known RBP	10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	OR51B4	Q9Y5P0	310 aa		10.64	□□□□□ -0.71
NECAP1-223	ENST00000640091	EIF3H	O15372	352 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	PAPLN	O95428	1278 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CD160	O95971	181 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	OAS2	P29728	719 aa	Known RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	CD86	P42081	329 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	LMAN2	Q12907	356 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ADAM15	Q13444	863 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZNF235	Q14590	738 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	KRT71	Q3SY84	523 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TTMP	Q5BVD1	217 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	MPP7	Q5T2T1	576 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TMCO4	Q5TGY1	634 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	KRT222	Q8N1A0	295 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	NAT16	Q8N8M0	369 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	FATE1	Q969F0	183 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ALG14	Q96F25	216 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZFYVE19	Q96K21	471 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	FAM161B	Q96MY7	647 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TTYH1	Q9H313	450 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	XAB2	Q9HCS7	855 aa	Known RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	SPHK2	Q9NRA0	654 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	UBA2	Q9UBT2	640 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	SDR42E2	A6NKP2	422 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091		K7ERQ8	282 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	TRIM24	O15164	1050 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	POLR3G	O15318	223 aa	Predicted RBP	10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	OPA1	O60313	960 aa		10.63	□□□□□ -0.71
NECAP1-223	ENST00000640091	ZMPSTE24	O75844	475 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms