RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	ITGB6	P18564	788 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A6	P19224	532 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A1	P22309	533 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A4	P22310	534 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	PDIA3	P30101	505 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A3	P35503	534 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A5	P35504	534 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	PPP3CC	P48454	512 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	CEBPA	P49715	358 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	HIRA	P54198	1017 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	RPS3A	P61247	264 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	YWHAE	P62258	255 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	HERVK_113	P62684	666 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	IL9R	Q01113	521 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	PTH1R	Q03431	593 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ASPG	Q86U10	573 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	LRRTM4	Q86VH4	590 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NLRP8	Q86W28	1048 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	CATSPER3	Q86XQ3	398 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ASCC1	Q8N9N2	400 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	TGFBRAP1	Q8WUH2	860 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	SYMPK	Q92797	1274 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	FBXL8	Q96CD0	374 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ACSF2	Q96CM8	615 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	TLCD1	Q96CP7	247 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	FAM122A	Q96E09	287 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	MCRS1	Q96EZ8	462 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	BIRC8	Q96P09	236 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	MTFR1L	Q9H019	292 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A7	Q9HAW7	530 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A10	Q9HAW8	530 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UGT1A8	Q9HAW9	530 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ZDHHC4	Q9NPG8	344 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NINJ2	Q9NZG7	142 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAN1B1	Q9UKM7	699 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	KCNH3	Q9ULD8	1083 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	FANCA	O15360	1455 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	LOC390937	A0A1W2PQ73	354 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ATP2A1	O14983	1001 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	DAPK3	O43293	454 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ITM2A	O43736	263 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	GMFG	O60234	142 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	IFNA16	P05015	189 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	MLN	P12872	115 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	PCSK2	P16519	638 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NMT1	P30419	496 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ADD1	P35611	737 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	WNT5A	P41221	380 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NR4A2	P43354	598 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	RNF144A	P50876	292 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ACTR3	P61158	418 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	SKP1	P63208	163 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ECT2L	Q008S8	904 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ALDH6A1	Q02252	535 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	GLO1	Q04760	184 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NFYC	Q13952	458 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ELOA	Q14241	798 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	KRT31	Q15323	416 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	TRIP13	Q15645	432 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	UAP1	Q16222	522 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	SLC9C1	Q4G0N8	1177 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ERCC6L2	Q5T890	1561 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	RRAGB	Q5VZM2	374 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	AFMID	Q63HM1	303 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	TMC3	Q7Z5M5	1100 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	KIF18B	Q86Y91	864 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	ARFGAP1	Q8N6T3	406 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	VANGL1	Q8TAA9	524 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	C19orf60	Q96EN9	201 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	GJD4	Q96KN9	370 aa	Predicted RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	CNBD2	Q96M20	576 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NSMCE2	Q96MF7	247 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	PHOX2B	Q99453	314 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	BTBD10	Q9BSF8	475 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NOC4L	Q9BVI4	516 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	SMOC1	Q9H4F8	434 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	NUDT15	Q9NV35	164 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	VPS9D1	Q9Y2B5	631 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	WBP11	Q9Y2W2	641 aa	Known RBP	6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	DMRT1	Q9Y5R6	373 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072		E9PCH4	1651 aa		6.24	□□□□□ -1.41
NECAP1-222	ENST00000640072	MYO5C	Q9NQX4	1742 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SOBP	A7XYQ1	873 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072		I3L4J1	428 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PQBP1	O60828	265 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DGAT1	O75907	488 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RECQL4	O94761	1208 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PLAT	P00750	562 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GNAO1	P09471	354 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PLCG1	P19174	1290 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ITIH1	P19827	911 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAT2A	P31153	395 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SLC26A2	P50443	739 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAPK10	P53779	464 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TNFAIP2	Q03169	654 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PRKCQ	Q04759	706 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PCDH1	Q08174	1060 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CARTPT	Q16568	116 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TAF1B	Q53T94	588 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MANEA	Q5SRI9	462 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms