RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 GRIK3Q13003 919 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 CASP8Q14790 479 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 RPS6KA1Q15418 735 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 RAB6CQ53S08 254 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 XKR4Q5GH76 650 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 PLPP4Q5VZY2 271 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 JADE1Q6IE81 842 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 ACAD10Q6JQN1 1059 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 TTC27Q6P3X3 843 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 RBM23Q86U06 439 aaKnown RBP6.33□□□□□ -1.4
ATM-229ENST00000639953 PPM1KQ8N3J5 372 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 FBXL13Q8NEE6 735 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATM-229ENST00000639953 ARL8AQ96BM9 186 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 CYFIP2Q96F07 1278 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 IGSF21Q96ID5 467 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 B3GALT6Q96L58 329 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 TWNKQ96RR1 684 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 RAB6CQ9H0N0 254 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 SEC61A2Q9H9S3 476 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 TLR9Q9NR96 1032 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 TUBGCP4Q9UGJ1 667 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 CYTH4Q9UIA0 394 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 CPSF3Q9UKF6 684 aaKnown RBP6.33□□□□□ -1.4
ATM-229ENST00000639953 INTUQ9ULD6 942 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 EXOC7Q9UPT5 735 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 ALG6Q9Y672 507 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 BZW2Q9Y6E2 419 aaKnown RBP6.33□□□□□ -1.4
ATM-229ENST00000639953 PRRC2BQ5JSZ5 2229 aaKnown RBP6.33□□□□□ -1.4
ATM-229ENST00000639953 VWA8A3KMH1 1905 aa6.33□□□□□ -1.4
ATM-229ENST00000639953 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 PLXNA3P51805 1871 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TCRBV5S1A1TA0A578 114 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ANKRD62A6NC57 917 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 I3L4J1 428 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 PPEF2O14830 753 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 LINC01565O15544 149 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 HCRTO43612 131 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 RTN2O75298 545 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 CXCL14O95715 111 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 WEE2P0C1S8 567 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 PYGMP11217 842 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 KCNE1P15382 129 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TCP1P17987 556 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 SCP2P22307 547 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 RRM1P23921 792 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 GTF2H1P32780 548 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ABCD1P33897 745 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 PPM1AP35813 382 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 NRIP1P48552 1158 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SELENOPP49908 381 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ZNF132P52740 706 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 CDR2Q01850 454 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 KRT17Q04695 432 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ADCY2Q08462 1091 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 RAB33AQ14088 237 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SMC1AQ14683 1233 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 MESDQ14696 234 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TERF2Q15554 542 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 UAP1Q16222 522 aaPredicted RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 ATP13A4Q4VNC1 1196 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TXNRD3NBQ6F5E7 133 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SLFN12LQ6IEE8 588 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 DENND1BQ6P3S1 775 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 CD300LGQ6UXG3 332 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 EP400NLQ6ZTU2 488 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 MTERF4Q7Z6M4 381 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 PRUNE1Q86TP1 453 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 OSTM1Q86WC4 334 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 PASD1Q8IV76 773 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 BRSK2Q8IWQ3 736 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 KRT222Q8N1A0 295 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 VPS52Q8N1B4 723 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ST13P5Q8NFI4 369 aaPredicted RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 RFFLQ8WZ73 363 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 NT5C1BQ96P26 610 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TCF25Q9BQ70 676 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TMEM175Q9BSA9 504 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TRIM51Q9BSJ1 452 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SELENOOQ9BVL4 669 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 DDX47Q9H0S4 455 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 ZBP1Q9H171 429 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 RPF1Q9H9Y2 349 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 ENTPD7Q9NQZ7 604 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 SEPT11Q9NVA2 429 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 RBAKQ9NYW8 714 aaPredicted RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 HMGXB4Q9UGU5 601 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 NFU1Q9UMS0 254 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
ATM-229ENST00000639953 CNTN6Q9UQ52 1028 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 TESMINQ9Y4I5 508 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
ATM-229ENST00000639953 ATP8B3O60423 1300 aa6.31□□□□□ -1.4
ATM-229ENST00000639953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.31□□□□□ -1.4
ATM-229ENST00000639953 TARSL2A2RTX5 802 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms