RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	hDV102S1	A0JD36	115 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	TIPRL	O75663	272 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZRANB2	O95218	330 aa	Known RBP eCLIP	0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	CLDN7	O95471	211 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	ENO3	P13929	434 aa	Predicted RBP	0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	PAX1	P15863	534 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	DRD3	P35462	400 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	CBFB	Q13951	182 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	TAF7L	Q5H9L4	462 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM196	Q5HYL7	178 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	KLB	Q86Z14	1044 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	TICAM1	Q8IUC6	712 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	ADGRF3	Q8IZF5	1079 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	OR2L2	Q8NH16	312 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM19	Q96HH6	336 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF354B	Q96LW1	612 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	C3orf30	Q96M34	536 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	EIF3C	Q99613	913 aa	Known RBP	0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	OSBPL5	Q9H0X9	879 aa	Predicted RBP	0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	BARHL2	Q9NY43	387 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	NYAP2	Q9P242	653 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF624	Q9P2J8	865 aa	Predicted RBP	0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	KCNS2	Q9ULS6	477 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	DAAM1	Q9Y4D1	1078 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959	SNX9	Q9Y5X1	595 aa		0.78	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A087X002	238 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ASPDH	A6ND91	283 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	SMIM1	B2RUZ4	78 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	KCNJ18	B7U540	433 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ZNF587B	E7ETH6	402 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	IFNL4	K9M1U5	179 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE7	O76087	117 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	KAT7	O95251	611 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ALDOC	P09972	364 aa	Known RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE12F	P0CL80	117 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE12G	P0CL81	117 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE12I	P0CL82	117 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CKMT1A	P12532	417 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CDH1	P12830	882 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	KRTAP10-10	P60014	251 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	KRT85	P78386	507 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CYP4A11	Q02928	519 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE1	Q13065	139 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GAGE4	Q13068	117 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ODF1	Q14990	250 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	FAM69B	Q5VUD6	431 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	PLAG1	Q6DJT9	500 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ERAP2	Q6P179	960 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	MDGA2	Q7Z553	956 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	SATL1	Q86VE3	508 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	MICU3	Q86XE3	530 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	YAF2	Q8IY57	180 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	SLC39A11	Q8N1S5	342 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CLASRP	Q8N2M8	674 aa	Known RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	EXD3	Q8N9H8	876 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	OVCA2	Q8WZ82	227 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	AGAP3	Q96P47	875 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CSF3R	Q99062	836 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CGRRF1	Q99675	332 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	SLC25A32	Q9H2D1	315 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	PLEKHA4	Q9H4M7	779 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	SFXN1	Q9H9B4	322 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	CLK4	Q9HAZ1	481 aa	Known RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	INTS10	Q9NVR2	710 aa	Known RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	GPR83	Q9NYM4	423 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	RALY	Q9UKM9	306 aa	Known RBP	0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	KLK13	Q9UKR3	277 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	PAM16	Q9Y3D7	125 aa		0.77	□□□□□ -2.29
LMBR1-222	ENST00000638959	PCNX3	Q9H6A9	2034 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	SHTN1	A0MZ66	631 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	INMT	O95050	263 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	PRSS56	P0CW18	603 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	HOXA13	P31271	388 aa	Predicted RBP	0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	GSTM5	P46439	218 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ECT2L	Q008S8	904 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ZNF155	Q12901	538 aa	Predicted RBP	0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	FAM53A	Q6NSI3	398 aa	Predicted RBP	0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	CCDC144NL	Q6NUI1	221 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	SLC27A1	Q6PCB7	646 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ZNF613	Q6PF04	617 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	DOK6	Q6PKX4	331 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	C16orf89	Q6UX73	402 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	DENND1C	Q8IV53	801 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	TMEM217	Q8N7C4	229 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	TEX45	Q8NA69	505 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ATP11C	Q8NB49	1132 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ATL2	Q8NHH9	583 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	GRHL3	Q8TE85	626 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	TM9SF4	Q92544	642 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	TANK	Q92844	425 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	WDR24	Q96S15	920 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	DDX23	Q9BUQ8	820 aa	Known RBP	0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	LHPP	Q9H008	270 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	HIPK3	Q9H422	1215 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	RXFP3	Q9NSD7	469 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ZDHHC7	Q9NXF8	308 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	ANAPC11	Q9NYG5	84 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	PCDHB7	Q9Y5E2	793 aa		0.76	□□□□□ -2.29
LMBR1-222	ENST00000638959	HSPB6	O14558	160 aa		0.75	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms