RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 FAM131CQ96AQ9 280 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 ACE2Q9BYF1 805 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 KDM4CQ9H3R0 1056 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 DYRK4Q9NR20 520 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 PARVAQ9NVD7 372 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 PCDHB9Q9Y5E1 797 aa17.11■□□□□ 0.33
CACNA1A-259ENST00000638114 TMEM131Q92545 1883 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 KCNK3O14649 394 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 CREB3O43889 395 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 RAMP2O60895 175 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 ZNF883P0CG24 379 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 SKILP12757 684 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 PSMA2P25787 234 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 EPHB2P29323 1055 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 MAT2AP31153 395 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 L1CAMP32004 1257 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 UBASH3AP57075 661 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 FAM193AP78312 1265 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 SHC2P98077 582 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 OGDHQ02218 1023 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 HNRNPDQ14103 355 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 FIGNQ5HY92 759 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 KCNT1Q5JUK3 1230 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 DPY19L3Q6ZPD9 716 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 ZNF354CQ86Y25 554 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 PCDH20Q8N6Y1 951 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 TMIEQ8NEW7 156 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 SKA1Q96BD8 255 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 SERAC1Q96JX3 654 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 EPAS1Q99814 870 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 MAGEH1Q9H213 219 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 FZD10Q9ULW2 581 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 HPCAL4Q9UM19 191 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 ACTL7AQ9Y615 435 aa17.1■□□□□ 0.33
CACNA1A-259ENST00000638114 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 VILLO15195 856 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 LATO43561 262 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 GZMAP12544 262 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CD38P28907 300 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CTSKP43235 329 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 AIF1P55008 147 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CCDC15Q0P6D6 951 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 POLD3Q15054 466 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 ZSCAN23Q3MJ62 389 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CARD16Q5EG05 197 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 ARSIQ5FYB1 569 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 PIP5KL1Q5T9C9 394 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 PLEKHA7Q6IQ23 1121 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 PRPF39Q86UA1 669 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 ARRDC3Q96B67 414 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 TM6SF2Q9BZW4 377 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 PREBQ9HCU5 417 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 TP53BP1Q12888 1972 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CHD5Q8TDI0 1954 aa17.09■□□□□ 0.33
CACNA1A-259ENST00000638114 CABIN1Q9Y6J0 2220 aa17.08■□□□□ 0.33
CACNA1A-259ENST00000638114 H0Y8X5 98 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 WNT9AO14904 365 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 LEFTY1O75610 366 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 WNT1P04628 370 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 CCNHP51946 323 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 GEMIN4P57678 1058 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 TAS2R38P59533 333 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 SUZ12Q15022 739 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 TRIP6Q15654 476 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 SLC45A4Q5BKX6 768 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 NAPEPLDQ6IQ20 393 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 TRIM69Q86WT6 500 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 RTL3Q8N8U3 475 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 PPP1R16AQ96I34 528 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 HEPHQ9BQS7 1158 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 CATSPERBQ9H7T0 1116 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 GPATCH2LQ9NWQ4 482 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 PCOLCE2Q9UKZ9 415 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 PCDHGB2Q9Y5G2 931 aa17.08■□□□□ 0.32
CACNA1A-259ENST00000638114 CXorf51AA0A1B0GTR3 108 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 A0A1W2PQJ5 194 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 A0A1W2PR77 199 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 RNF103O00237 685 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 FLRT2O43155 660 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 CD160O95971 181 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 TOP3BO95985 862 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 SPINK2P20155 84 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 PBX1P40424 430 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 CCT8P50990 548 aa17.07■□□□□ 0.32
CACNA1A-259ENST00000638114 IL9RQ01113 521 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms