RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ALOX15BO15296 676 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 RHOQP17081 205 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 GKP32189 559 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 CTSKP43235 329 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 RACK1P63244 317 aaKnown RBP18.1■□□□□ 0.49
PNKP-230ENST00000638016 TEAD4Q15561 434 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 ARSIQ5FYB1 569 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 SFMBT2Q5VUG0 894 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 FAM46CQ5VWP2 391 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 OR6K2Q8NGY2 324 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 SETD7Q8WTS6 366 aaKnown RBP18.1■□□□□ 0.49
PNKP-230ENST00000638016 KLK6Q92876 244 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 ARHGEF2Q92974 986 aaKnown RBP18.1■□□□□ 0.49
PNKP-230ENST00000638016 MYOCQ99972 504 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 ACE2Q9BYF1 805 aaPredicted RBP18.1■□□□□ 0.49
PNKP-230ENST00000638016 KLC2Q9H0B6 622 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 NOL6Q9H6R4 1146 aaKnown RBP18.1■□□□□ 0.49
PNKP-230ENST00000638016 ARHGAP20Q9P2F6 1191 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 WASF2Q9Y6W5 498 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 A0A1W2PR77 199 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 CBFA2T3O75081 653 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 DNA2P51530 1060 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 CCR5P51681 352 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 CLCN6P51797 869 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 FANCCQ00597 558 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 SCAPQ12770 1279 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 SFSWAPQ12872 951 aaKnown RBP18.09■□□□□ 0.49
PNKP-230ENST00000638016 SLC14A1Q13336 389 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 MAMLD1Q13495 774 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 ACBD5Q5T8D3 534 aaPredicted RBP18.09■□□□□ 0.49
PNKP-230ENST00000638016 DCUN1D2Q6PH85 259 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 IL27RAQ6UWB1 636 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 ZNF783Q6ZMS7 281 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 TMC6Q7Z403 805 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 ARFGAP1Q8N6T3 406 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 PNPLA1Q8N8W4 532 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 SERAC1Q96JX3 654 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 PEBP4Q96S96 227 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 CNPY3Q9BT09 278 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 SCNM1Q9BWG6 230 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 CAAP1Q9H8G2 361 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 TMEM51Q9NW97 253 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 PCOLCE2Q9UKZ9 415 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 FZD10Q9ULW2 581 aa18.09■□□□□ 0.49
PNKP-230ENST00000638016 IGF2RP11717 2491 aa18.08■□□□□ 0.49
PNKP-230ENST00000638016 ASPMQ8IZT6 3477 aa18.08■□□□□ 0.49
PNKP-230ENST00000638016 C1QTNF9BB2RNN3 333 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 VILLO15195 856 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 LATO43561 262 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 CREB3O43889 395 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 LEFTY1O75610 366 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 CCDC172P0C7W6 258 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 C1QTNF9P0C862 333 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 PRLRP16471 622 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 EPHB2P29323 1055 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 MAPKAPK2P49137 400 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 TRIP6Q15654 476 aaKnown RBP18.08■□□□□ 0.48
PNKP-230ENST00000638016 CA9Q16790 459 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 EFHC2Q5JST6 749 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 RETSATQ6NUM9 610 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 VOPP1Q96AW1 172 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 IL36AQ9UHA7 158 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 KLK13Q9UKR3 277 aa18.08■□□□□ 0.48
PNKP-230ENST00000638016 USP24Q9UPU5 2620 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 AKAP13Q12802 2813 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 SLC7A4O43246 635 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 RAMP2O60895 175 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 FTLP02792 175 aaPredicted RBP18.07■□□□□ 0.48
PNKP-230ENST00000638016 ZNF883P0CG24 379 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 PSMA2P25787 234 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 CD38P28907 300 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 L1CAMP32004 1257 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 PBX1P40424 430 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 PRKCIP41743 596 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 CCNHP51946 323 aaPredicted RBP18.07■□□□□ 0.48
PNKP-230ENST00000638016 C21orf59P57076 290 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 KLHL30Q0D2K2 578 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 SHBQ15464 509 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 ZNF423Q2M1K9 1284 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 PLEKHA7Q6IQ23 1121 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 GATAD2AQ86YP4 633 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 CHCHD4Q8N4Q1 142 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
PNKP-230ENST00000638016 CCDC114Q96M63 670 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 FZD3Q9NPG1 666 aa18.07■□□□□ 0.48
PNKP-230ENST00000638016 TRPM6Q9BX84 2022 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 A0A1W2PQU0 124 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 RNGTTO60942 597 aaKnown RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 FTH1P19P0C7X4 201 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 RECQLP46063 649 aaPredicted RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 CARD16Q5EG05 197 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
PNKP-230ENST00000638016 SEL1L3Q68CR1 1132 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 NAPEPLDQ6IQ20 393 aa18.06■□□□□ 0.48
PNKP-230ENST00000638016 DBX2Q6ZNG2 339 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms