RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NOMO1Q15155 1222 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GAB4Q2WGN9 574 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PLEKHG6Q3KR16 790 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ATP13A4Q4VNC1 1196 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ALFQ53S48 1182 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 INO80DQ53TQ3 878 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TMEM196Q5HYL7 178 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 RALGPS1Q5JS13 557 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 DGKKQ5KSL6 1271 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 FAM72AQ5TYM5 149 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 DCAF12L1Q5VU92 463 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 DAB2IPQ5VWQ8 1189 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 FAM72DQ6L9T8 149 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 RETSATQ6NUM9 610 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF852Q6ZMS4 543 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TPGS1Q6ZTW0 290 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 FAM72BQ86X60 149 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TMEM25Q86YD3 366 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 SLC13A5Q86YT5 568 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 RFX6Q8HWS3 928 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 RNF135Q8IUD6 432 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PYROXD2Q8N2H3 581 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PHTF2Q8N3S3 785 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PLD5Q8N7P1 536 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 NSMCE1Q8WV22 266 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ARHGEF2Q92974 986 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 IGSF8Q969P0 613 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TTC17Q96AE7 1141 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 OLFM3Q96PB7 478 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 WDR24Q96S15 920 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PNKPQ96T60 521 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 P2RY13Q9BPV8 354 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ACE2Q9BYF1 805 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 LINC00597Q9H2U6 94 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ARHGEF3Q9NR81 526 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GPATCH2LQ9NWQ4 482 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 FEZ2Q9UHY8 353 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 DNAI1Q9UI46 699 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PACSIN2Q9UNF0 486 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 HS3ST2Q9Y278 367 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 OR51B4Q9Y5P0 310 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PIAS3Q9Y6X2 628 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 REV3LO60673 3130 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GOLGA6L7A0A1B0GV03 622 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 MFSD11O43934 449 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CST8O60676 142 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 KAT7O95251 611 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ATP1A1P05023 1023 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ASGR2P07307 311 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CD48P09326 243 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 DLDP09622 509 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ALADP13716 330 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 TNNT1P13805 278 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SP100P23497 879 aaPredicted RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CCNCP24863 283 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 GARSP41250 739 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 FNTAP49354 379 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 RENBPP51606 427 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SGSHP51688 502 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 MRPS21P82921 87 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 PPIDQ08752 370 aaKnown RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SIGLEC14Q08ET2 396 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 LMAN2Q12907 356 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ENPP2Q13822 863 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 GRM3Q14832 879 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SLC14A2Q15849 920 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CCNG2Q16589 344 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CYP1B1Q16678 543 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 WHAMMP3Q1A5X7 153 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SLC44A4Q53GD3 710 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 PITRM1Q5JRX3 1037 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CCDC181Q5TID7 509 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 C4orf22Q6V702 233 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF572Q7Z3I7 529 aaPredicted RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 C14orf80Q86SX3 495 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CDKL3Q8IVW4 592 aaPredicted RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ARHGAP12Q8IWW6 846 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CARNMT1Q8N4J0 409 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ATPAF2Q8N5M1 289 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 PQLC3Q8N755 202 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 TTC16Q8NEE8 873 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 GRK7Q8WTQ7 553 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 RSAD2Q8WXG1 361 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 SLCO2A1Q92959 643 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ALG14Q96F25 216 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 ZFYVE19Q96K21 471 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 CCDC114Q96M63 670 aa6.86□□□□□ -1.31
UPF3B-205ENST00000636792 UHRF1Q96T88 793 aaPredicted RBP6.86□□□□□ -1.31
UPF3B-205ENST00000636792 FEM1AQ9BSK4 669 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms