RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 PRKCIP41743 596 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 CSNK1EP49674 416 aaKnown RBP18.79■□□□□ 0.6
CLN6-214ENST00000636314 ADPRHP54922 357 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 RPL7AP62424 266 aaKnown RBP18.79■□□□□ 0.6
CLN6-214ENST00000636314 GNA12Q03113 381 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 KLHL30Q0D2K2 578 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 TEAD4Q15561 434 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 EFHC2Q5JST6 749 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 PPP1R15BQ5SWA1 713 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
CLN6-214ENST00000636314 RETSATQ6NUM9 610 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 SCYL2Q6P3W7 929 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 LINGO4Q6UY18 593 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 TMPRSS7Q7RTY8 843 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 SLFN11Q7Z7L1 901 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 MARCH9Q86YJ5 346 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 OR14C36Q8NHC7 312 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 C1orf216Q8TAB5 229 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 BAHD1Q8TBE0 780 aaPredicted RBP18.79■□□□□ 0.6
CLN6-214ENST00000636314 LRIG1Q96JA1 1093 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 VCPIP1Q96JH7 1222 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 CNPY3Q9BT09 278 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 EDEM3Q9BZQ6 932 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 TM9SF3Q9HD45 589 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 TOR4AQ9NXH8 423 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 PCDHGB2Q9Y5G2 931 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 SLCO1B1Q9Y6L6 691 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 CELSR3Q9NYQ7 3312 aa18.79■□□□□ 0.6
CLN6-214ENST00000636314 APC2O95996 2303 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 FAM72CH0Y354 149 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 K7ERQ8 282 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 MCF2LO15068 1137 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 IGHV4-34P06331 123 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 PLEKP08567 350 aaPredicted RBP18.78■□□□□ 0.6
CLN6-214ENST00000636314 RHOQP17081 205 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 GLDCP23378 1020 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 DRD3P35462 400 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 ETFBP38117 255 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 MAPKAPK2P49137 400 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 METAP1P53582 386 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 UBASH3AP57075 661 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 SUZ12Q15022 739 aaKnown RBP18.78■□□□□ 0.6
CLN6-214ENST00000636314 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 POM121L1PQ3SYA9 428 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 FIGNQ5HY92 759 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 FAM72AQ5TYM5 149 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 FAM72DQ6L9T8 149 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 C22orf39Q6P5X5 142 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 ZNF571Q7Z3V5 609 aaPredicted RBP18.78■□□□□ 0.6
CLN6-214ENST00000636314 FAM72BQ86X60 149 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 PIP4K2CQ8TBX8 421 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 RETREG1Q9H6L5 497 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 OSGEPQ9NPF4 335 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 PARVAQ9NVD7 372 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 SARDHQ9UL12 918 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 NEU3Q9UQ49 428 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 BTBD3Q9Y2F9 522 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 CHD5Q8TDI0 1954 aa18.78■□□□□ 0.6
CLN6-214ENST00000636314 CABIN1Q9Y6J0 2220 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 SLC7A4O43246 635 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 ATMINO43313 823 aaPredicted RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 SMAD6O43541 496 aaKnown RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 RECQLP46063 649 aaPredicted RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 GRIA4P48058 902 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 SERPINH1P50454 418 aaKnown RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 CCDC157Q569K6 752 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 ADAT2Q7Z6V5 191 aaKnown RBP18.77■□□□□ 0.6
CLN6-214ENST00000636314 NLRP14Q86W24 1093 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 TMEM248Q9NWD8 314 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 DNAI1Q9UI46 699 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 PPM1HQ9ULR3 514 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 SNX11Q9Y5W9 270 aa18.77■□□□□ 0.6
CLN6-214ENST00000636314 SMG1Q96Q15 3661 aaKnown RBP18.77■□□□□ 0.59
CLN6-214ENST00000636314 KNL1Q8NG31 2342 aa18.77■□□□□ 0.59
CLN6-214ENST00000636314 GCN1Q92616 2671 aaKnown RBP18.77■□□□□ 0.59
CLN6-214ENST00000636314 A0A1W2PPC4 97 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 EIF4E1BA6NMX2 242 aaKnown RBP18.76■□□□□ 0.59
CLN6-214ENST00000636314 PLK4O00444 970 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 AIF1P55008 147 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 ARF5P84085 180 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 CYP4F3Q08477 520 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 KIF19Q2TAC6 998 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 SKOR2Q2VWA4 1001 aaPredicted RBP18.76■□□□□ 0.59
CLN6-214ENST00000636314 TDRD12Q587J7 1177 aaKnown RBP18.76■□□□□ 0.59
CLN6-214ENST00000636314 LAYNQ6UX15 382 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 DBX2Q6ZNG2 339 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 TMC6Q7Z403 805 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 GALNT15Q8N3T1 639 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 OR2A12Q8NGT7 310 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 ORAI3Q9BRQ5 295 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 MAGEB5Q9BZ81 275 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 TNKS2Q9H2K2 1166 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 SCUBE2Q9NQ36 999 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 NDFIP2Q9NV92 336 aa18.76■□□□□ 0.59
CLN6-214ENST00000636314 TPX2Q9ULW0 747 aaKnown RBP18.76■□□□□ 0.59
CLN6-214ENST00000636314 URB1O60287 2271 aaKnown RBP18.76■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3DA0A087WVF3 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3IA0A087WXS9 549 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms