RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SLC30A1Q9Y6M5 507 aa4.63□□□□□ -1.67
SCN1A-210ENST00000635776 SLC12A8A0AV02 714 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DNM1LO00429 736 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 INPPL1O15357 1258 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PEX10O60683 326 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 NDUFS3O75489 264 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 LATS1O95835 1130 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 POMCP01189 267 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 FGFR1P11362 822 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SAT1P21673 171 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TARSP26639 723 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TM4SF4P48230 202 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PIK3CGP48736 1102 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TAF5Q15542 800 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ADRM1Q16186 407 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PRAMEF19Q5SWL8 479 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TPGS2Q68CL5 300 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TRIM67Q6ZTA4 783 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SPATA24Q86W54 205 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 OSTM1Q86WC4 334 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PLCD3Q8N3E9 789 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 EDEM1Q92611 657 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZBTB18Q99592 522 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ACE2Q9BYF1 805 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SMYD2Q9NRG4 433 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RAD18Q9NS91 495 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PDP2Q9P2J9 529 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DNMT3LQ9UJW3 386 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 FBXO5Q9UKT4 447 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PAPPA2Q9BXP8 1791 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 FAM95CA0A1B0GW59 222 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ARPP19P56211 112 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RPL26P61254 145 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 KLC1Q07866 573 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 EFTUD2Q15029 972 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 UPP1Q16831 310 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 AASDHQ4L235 1098 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 LYPLAL1Q5VWZ2 237 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CAND1Q86VP6 1230 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 EMILIN2Q9BXX0 1053 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SYBUQ9NX95 663 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TBC1D30Q9Y2I9 924 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RHOCP08134 193 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 HOXC8P31273 242 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ACLYP53396 1101 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 USP41Q3LFD5 358 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZDHHC20Q5W0Z9 365 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF783Q6ZMS7 281 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DCLK2Q8N568 766 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CCNYL1Q8N7R7 359 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PBXIP1Q96AQ6 731 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PLD4Q96BZ4 506 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 IL12RB2Q99665 862 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TBC1D10AQ9BXI6 508 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 MTIF3Q9H2K0 278 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PIGVQ9NUD9 493 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TAS2R13Q9NYV9 303 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GTSE1Q9NYZ3 720 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PRG3Q9Y2Y8 225 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TLL2Q9Y6L7 1015 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 STX7O15400 261 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 PAGE1O75459 146 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ENO1P06733 434 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 FOXN2P32314 431 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 NNMTP40261 264 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CDH4P55283 916 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CRY1Q16526 586 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 HECTD3Q5T447 861 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GALNT7Q86SF2 657 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ST13P4Q8IZP2 240 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 AZIN2Q96A70 460 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SEPT5Q99719 369 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SLC25A23Q9BV35 468 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DRC3Q9H069 523 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GPBP1L1Q9HC44 474 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SRRDQ9UH36 339 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 LRCH1Q9Y2L9 728 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TCAF1Q9Y4C2 921 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 TNPO3Q9Y5L0 923 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 MYBPHLA2RUH7 354 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GPR17Q13304 367 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CRTAC1Q9NQ79 661 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 C8orf4Q9NR00 106 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 BBIP1A8MTZ0 92 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 C2P06681 752 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 DDX5P17844 614 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 IL4RP24394 825 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ETV4P43268 484 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 MAGEA3P43357 314 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 ALDH18A1P54886 795 aaKnown RBP4.62□□□□□ -1.67
SCN1A-210ENST00000635776 EFEMP1Q12805 493 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 OVGP1Q12889 678 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 GRM3Q14832 879 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 SPATS1Q496A3 300 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 CMPK2Q5EBM0 449 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 AFTPHQ6ULP2 937 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 KYQ8NBH2 561 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 RMDN1Q96DB5 314 aa4.62□□□□□ -1.67
SCN1A-210ENST00000635776 VCX3AQ9NNX9 186 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms