RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 LRRC57Q8N9N7 239 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 NETO2Q8NC67 525 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 ISG20Q96AZ6 181 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 RNF25Q96BH1 459 aaPredicted RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 RNF157Q96PX1 679 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 MAK16Q9BXY0 300 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 TNKS2Q9H2K2 1166 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 USP36Q9P275 1121 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 RAB23Q9ULC3 237 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 GUCA1BQ9UMX6 200 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 SCML1Q9UN30 329 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 CYP8B1Q9UNU6 501 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 ACTL7AQ9Y615 435 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 PROB1E7EW31 1015 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 J3KR12 359 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 MCF2LO15068 1137 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 MFSD11O43934 449 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 PALMO75781 387 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 TMCC1O94876 653 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 ADH1BP00325 375 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 IL1BP01584 269 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 C7P10643 843 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 PSMD8P48556 350 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 TPMTP51580 245 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 SFSWAPQ12872 951 aaKnown RBP15.77■□□□□ 0.11
CLN6-211ENST00000635754 CST6Q15828 149 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 PEX26Q7Z412 305 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 ATPAF2Q8N5M1 289 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 OR2A12Q8NGT7 310 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 NKD2Q969F2 451 aaPredicted RBP15.77■□□□□ 0.11
CLN6-211ENST00000635754 RBM41Q96IZ5 413 aaKnown RBP15.77■□□□□ 0.11
CLN6-211ENST00000635754 FAM129BQ96TA1 746 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 TM6SF2Q9BZW4 377 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 PDFQ9HBH1 243 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 ITM2CQ9NQX7 267 aa15.77■□□□□ 0.11
CLN6-211ENST00000635754 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.11
CLN6-211ENST00000635754 SMG5Q9UPR3 1016 aaKnown RBP15.77■□□□□ 0.11
CLN6-211ENST00000635754 SHROOM3Q8TF72 1996 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 VPS13AQ96RL7 3174 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 IGHV1OR15-9A0A0B4J2B8 117 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 CCDC66A2RUB6 948 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 C1QTNF3-AMACRE9PGA6 284 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 MAP3K13O43283 966 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 ZNF821O75541 412 aaPredicted RBP15.76■□□□□ 0.11
CLN6-211ENST00000635754 ZRANB2O95218 330 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLN6-211ENST00000635754 ZFXP17010 805 aaPredicted RBP15.76■□□□□ 0.11
CLN6-211ENST00000635754 CTNNA2P26232 953 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 MARCKSL1P49006 195 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 SNRPD1P62314 119 aaKnown RBP15.76■□□□□ 0.11
CLN6-211ENST00000635754 IL10RBQ08334 325 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 ELF2Q15723 593 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 FAM46CQ5VWP2 391 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 MFSD7Q6UXD7 560 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 SLC36A4Q6YBV0 504 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 ARHGAP36Q6ZRI8 547 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 RFX6Q8HWS3 928 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 LRRC49Q8IUZ0 686 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 CCDC50Q8IVM0 306 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 TP53INP2Q8IXH6 220 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 RCOR2Q8IZ40 523 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 FAM160A2Q8N612 972 aaPredicted RBP15.76■□□□□ 0.11
CLN6-211ENST00000635754 PQLC3Q8N755 202 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 KRT35Q92764 455 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 PHOX2BQ99453 314 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 PABPC3Q9H361 631 aaKnown RBP15.76■□□□□ 0.11
CLN6-211ENST00000635754 CD93Q9NPY3 652 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 LZTFL1Q9NQ48 299 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 NCKAP1Q9Y2A7 1128 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 PPP2R2CQ9Y2T4 447 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 PCDHA3Q9Y5H8 950 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 CAPN6Q9Y6Q1 641 aa15.76■□□□□ 0.11
CLN6-211ENST00000635754 THADAQ6YHU6 1953 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 APOL1O14791 398 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 GSRP00390 522 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 IGLV3-19P01714 112 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
CLN6-211ENST00000635754 PRNPP04156 253 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 C5AR1P21730 350 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 BCKDHBP21953 392 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 OXTRP30559 389 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 CHRNA3P32297 505 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 SLC8A1P32418 973 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 CDKN2BP42772 138 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 CCNHP51946 323 aaPredicted RBP15.75■□□□□ 0.11
CLN6-211ENST00000635754 RHOAP61586 193 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 TFDP2Q14188 446 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 RFTN1Q14699 578 aaPredicted RBP15.75■□□□□ 0.11
CLN6-211ENST00000635754 CARD16Q5EG05 197 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 TFDP3Q5H9I0 405 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 SLC9A4Q6AI14 798 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 SPOCD1Q6ZMY3 1216 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 DPY19L3Q6ZPD9 716 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 NT5DC3Q86UY8 548 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 KBTBD6Q86V97 674 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 PLPP6Q8IY26 295 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 RYBPQ8N488 228 aaPredicted RBP15.75■□□□□ 0.11
CLN6-211ENST00000635754 OR2AP1Q8NGE2 309 aa15.75■□□□□ 0.11
CLN6-211ENST00000635754 EXD1Q8NHP7 514 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms