RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 NIPAL4Q0D2K0 466 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 SNX1Q13596 522 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 HNRNPDQ14103 355 aaKnown RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 DLG2Q15700 870 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 ZNF852Q6ZMS4 543 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 ATPAF2Q8N5M1 289 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 ZNF366Q8N895 744 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 KDM1BQ8NB78 822 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 TSEN2Q8NCE0 465 aaKnown RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 SPATA4Q8NEY3 305 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 ARRDC2Q8TBH0 407 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 TFB1MQ8WVM0 346 aaKnown RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 PTPRN2Q92932 1015 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 CLDN23Q96B33 292 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 TADA1Q96BN2 335 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 GABRG3Q99928 467 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 TMEM121Q9BTD3 319 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 C2orf49Q9BVC5 232 aaPredicted RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 CEP41Q9BYV8 373 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 FRMD8P1Q9BZ68 369 aaPredicted RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 CIPCQ9C0C6 399 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 BRD8Q9H0E9 1235 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 RRAGDQ9NQL2 400 aaPredicted RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 RNF14Q9UBS8 474 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 NDRG2Q9UN36 371 aaKnown RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 DRG1Q9Y295 367 aaKnown RBP8.48□□□□□ -1.05
MECP2-220ENST00000631210 ATP8A1Q9Y2Q0 1164 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 CACNA1IQ9P0X4 2223 aa8.48□□□□□ -1.05
MECP2-220ENST00000631210 A0A1W2PQF6 199 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 C5orf60A6NFR6 353 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ZSCAN5CA6NGD5 496 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 CHURC1-FNTBB4DL54 471 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 BHMG1C9JSJ3 638 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 H7C0C1 242 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 SGK1O00141 431 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 KRIT1O00522 736 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 PPP1R12AO14974 1030 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 MCF2LO15068 1137 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 INSIG1O15503 277 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 RNF40O75150 1001 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 JCHAINP01591 159 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ITGAVP06756 1048 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 MMP2P08253 660 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ZSCAN5DPP0CG00 497 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 HLA-EP13747 358 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 CCNB1P14635 433 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 COL9A1P20849 921 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 TIE1P35590 1138 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 WASP42768 502 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ATP5OP48047 213 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 SEC13P55735 322 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 MAXP61244 160 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 AP1B1Q10567 949 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 GRSF1Q12849 480 aaKnown RBP eCLIP8.47□□□□□ -1.05
MECP2-220ENST00000631210 BYSLQ13895 437 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 LBRQ14739 615 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 WHAMMP3Q1A5X7 153 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 HNRNPA1L2Q32P51 320 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 TEX44Q53QW1 395 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 C9orf64Q5T6V5 341 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 TMCO4Q5TGY1 634 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 KIAA1211LQ6NV74 962 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 C22orf39Q6P5X5 142 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 BZW1Q7L1Q6 419 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 ZNF567Q8N184 647 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ALLCQ8N6M5 410 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 FAM71DQ8N9W8 422 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 CCNYQ8ND76 341 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 PJA1Q8NG27 643 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 KCNV2Q8TDN2 545 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 MAIP1Q8WWC4 291 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 HTR3CQ8WXA8 447 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 SLCO2A1Q92959 643 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 ISG20Q96AZ6 181 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 TEKT5Q96M29 485 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 PSKH2Q96QS6 385 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 FAM129BQ96TA1 746 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 MGME1Q9BQP7 344 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 OSBPL6Q9BZF3 934 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 DDX47Q9H0S4 455 aaKnown RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 EPHX3Q9H6B9 360 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 LMAN1LQ9HAT1 526 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 SP110Q9HB58 689 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 UBA2Q9UBT2 640 aaPredicted RBP8.47□□□□□ -1.05
MECP2-220ENST00000631210 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 STON1Q9Y6Q2 735 aa8.47□□□□□ -1.05
MECP2-220ENST00000631210 FAM170BA6NMN3 283 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 TP73O15350 636 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 KCNN4O15554 427 aa8.46□□□□□ -1.06
MECP2-220ENST00000631210 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.06
MECP2-220ENST00000631210 SIN3BO75182 1162 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms